This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3kpa
From Proteopedia
(Difference between revisions)
m (Protected "3kpa" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Ubiquitin fold modifier conjugating enzyme from Leishmania major (probable)== | |
| - | + | <StructureSection load='3kpa' size='340' side='right' caption='[[3kpa]], [[Resolution|resolution]] 2.20Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3kpa]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KPA OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3KPA FirstGlance]. <br> |
| - | [[3kpa]] is a 3 chain structure with sequence from [http://en.wikipedia.org/wiki/Leishmania_major Leishmania major]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3KPA OCA]. | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2in1|2in1]], [[2z6o|2z6o]], [[2k07|2k07]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">LmjF15.1250 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=5664 Leishmania major])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3kpa FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3kpa OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3kpa RCSB], [http://www.ebi.ac.uk/pdbsum/3kpa PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/kp/3kpa_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Leishmania major]] | [[Category: Leishmania major]] | ||
| - | [[Category: Han, G W | + | [[Category: Han, G W]] |
| - | [[Category: Merritt, E A | + | [[Category: Merritt, E A]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Trong, I Le | + | [[Category: Trong, I Le]] |
[[Category: Ligase]] | [[Category: Ligase]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
[[Category: Sgpp]] | [[Category: Sgpp]] | ||
| - | [[Category: Structural genomic]] | ||
| - | [[Category: Structural genomics of pathogenic protozoa consortium]] | ||
[[Category: Ubl conjugation pathway]] | [[Category: Ubl conjugation pathway]] | ||
Revision as of 15:52, 18 December 2014
Ubiquitin fold modifier conjugating enzyme from Leishmania major (probable)
| |||||||||||
