This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3jvn

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3jvn" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_3jvn| PDB=3jvn | SCENE= }}
+
==Crystal Structure of the acetyltransferase VF_1542 from Vibrio fischeri, Northeast Structural Genomics Consortium Target VfR136==
-
===Crystal Structure of the acetyltransferase VF_1542 from Vibrio fischeri, Northeast Structural Genomics Consortium Target VfR136===
+
<StructureSection load='3jvn' size='340' side='right' caption='[[3jvn]], [[Resolution|resolution]] 2.61&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[3jvn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aliivibrio_fischeri Aliivibrio fischeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JVN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JVN FirstGlance]. <br>
-
[[3jvn]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Aliivibrio_fischeri Aliivibrio fischeri]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JVN OCA].
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VF_1542 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=668 Aliivibrio fischeri])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jvn FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jvn OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jvn RCSB], [http://www.ebi.ac.uk/pdbsum/3jvn PDBsum]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/3jvn_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Aliivibrio fischeri]]
[[Category: Aliivibrio fischeri]]
-
[[Category: Acton, T B.]]
+
[[Category: Acton, T B]]
-
[[Category: Ciccosanti,C.]]
+
[[Category: Ciccosanti,C]]
-
[[Category: Everett, J K.]]
+
[[Category: Everett, J K]]
-
[[Category: Forouhar, F.]]
+
[[Category: Forouhar, F]]
-
[[Category: Hunt, J F.]]
+
[[Category: Hunt, J F]]
-
[[Category: Mao, M.]]
+
[[Category: Mao, M]]
-
[[Category: Montelione, G T.]]
+
[[Category: Montelione, G T]]
-
[[Category: NESG, Northeast Structural Genomics Consortium.]]
+
[[Category: Structural genomic]]
-
[[Category: Nair, R.]]
+
[[Category: Nair, R]]
-
[[Category: Neely, H.]]
+
[[Category: Neely, H]]
-
[[Category: Rost, B.]]
+
[[Category: Rost, B]]
-
[[Category: Seetharaman, J.]]
+
[[Category: Seetharaman, J]]
-
[[Category: Tong, L.]]
+
[[Category: Tong, L]]
-
[[Category: Xiao, R.]]
+
[[Category: Xiao, R]]
-
[[Category: Zhao, L.]]
+
[[Category: Zhao, L]]
[[Category: Acyltransferase]]
[[Category: Acyltransferase]]
[[Category: Alpha-beta protein]]
[[Category: Alpha-beta protein]]
[[Category: Nesg]]
[[Category: Nesg]]
-
[[Category: Northeast structural genomics consortium]]
+
[[Category: PSI, Protein structure initiative]]
-
[[Category: Protein structure initiative]]
+
-
[[Category: Psi-2]]
+
-
[[Category: Structural genomic]]
+
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 15:53, 18 December 2014

Crystal Structure of the acetyltransferase VF_1542 from Vibrio fischeri, Northeast Structural Genomics Consortium Target VfR136

3jvn, resolution 2.61Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools