We apologize for Proteopedia being slow to respond. For the past two years, a new implementation of Proteopedia has been being built. Soon, it will replace this 18-year old system. All existing content will be moved to the new system at a date that will be announced here.
3ni2
From Proteopedia
(Difference between revisions)
m (Protected "3ni2" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate:CoA ligase== | |
| - | + | <StructureSection load='3ni2' size='340' side='right' caption='[[3ni2]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3ni2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Populus_tomentosa Populus tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NI2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NI2 FirstGlance]. <br> | |
| - | == | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AYL:5-O-{(S)-HYDROXY[3-(4-HYDROXYPHENYL)PROPOXY]PHOSPHORYL}ADENOSINE'>AYL</scene>, <scene name='pdbligand=EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINE+ETHANESULFONIC+ACID'>EPE</scene></td></tr> |
| - | [[3ni2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Populus_tomentosa Populus tomentosa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NI2 OCA]. | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3a9u|3a9u]], [[3a9v|3a9v]]</td></tr> |
| + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-coumarate--CoA_ligase 4-coumarate--CoA ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.2.1.12 6.2.1.12] </span></td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ni2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3ni2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3ni2 RCSB], [http://www.ebi.ac.uk/pdbsum/3ni2 PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/ni/3ni2_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: 4-coumarate--CoA ligase]] | [[Category: 4-coumarate--CoA ligase]] | ||
[[Category: Populus tomentosa]] | [[Category: Populus tomentosa]] | ||
| - | [[Category: Gai, Y | + | [[Category: Gai, Y]] |
| - | [[Category: Hu, Y | + | [[Category: Hu, Y]] |
| - | [[Category: Wang, D C | + | [[Category: Wang, D C]] |
| - | [[Category: Wang, X X | + | [[Category: Wang, X X]] |
| - | [[Category: Yin, L | + | [[Category: Yin, L]] |
[[Category: 4-coumarate:coa ligase]] | [[Category: 4-coumarate:coa ligase]] | ||
| - | [[Category: 4cl]] | ||
[[Category: Ligase]] | [[Category: Ligase]] | ||
[[Category: Phenylpropanoid biosynthesis]] | [[Category: Phenylpropanoid biosynthesis]] | ||
Revision as of 16:51, 18 December 2014
Crystal structures and enzymatic mechanisms of a Populus tomentosa 4-coumarate:CoA ligase
| |||||||||||
