3l8m
From Proteopedia
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| - | + | ==Crystal Structure of a probable thiamine pyrophosphokinase from Staphylococcus saprophyticus subsp. saprophyticus. Northeast Structural Genomics Consortium target id SyR86== | |
| - | + | <StructureSection load='3l8m' size='340' side='right' caption='[[3l8m]], [[Resolution|resolution]] 2.40Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3l8m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_saprophyticus Staphylococcus saprophyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L8M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L8M FirstGlance]. <br> |
| - | [[3l8m]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Staphylococcus_saprophyticus Staphylococcus saprophyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L8M OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> |
| + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SSP1549 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=29385 Staphylococcus saprophyticus])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l8m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l8m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3l8m RCSB], [http://www.ebi.ac.uk/pdbsum/3l8m PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l8/3l8m_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Staphylococcus saprophyticus]] | [[Category: Staphylococcus saprophyticus]] | ||
| - | [[Category: Acton, T B | + | [[Category: Acton, T B]] |
| - | [[Category: Baran, M C | + | [[Category: Baran, M C]] |
| - | [[Category: Cunningham, K | + | [[Category: Cunningham, K]] |
| - | [[Category: Hunt, J F | + | [[Category: Hunt, J F]] |
| - | [[Category: Janjua, H | + | [[Category: Janjua, H]] |
| - | [[Category: Lew, S | + | [[Category: Lew, S]] |
| - | [[Category: Liu, J | + | [[Category: Liu, J]] |
| - | [[Category: Montelione, G T | + | [[Category: Montelione, G T]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Owens, L | + | [[Category: Owens, L]] |
| - | [[Category: Seetharaman, J | + | [[Category: Seetharaman, J]] |
| - | [[Category: Tong, L | + | [[Category: Tong, L]] |
| - | [[Category: Wang, D | + | [[Category: Wang, D]] |
| - | [[Category: Xiao, R | + | [[Category: Xiao, R]] |
[[Category: Atp binding]] | [[Category: Atp binding]] | ||
[[Category: Kinase]] | [[Category: Kinase]] | ||
[[Category: Nesg]] | [[Category: Nesg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
[[Category: Thiamin diphosphate biosynthetic process]] | [[Category: Thiamin diphosphate biosynthetic process]] | ||
[[Category: Transferase]] | [[Category: Transferase]] | ||
Revision as of 17:09, 18 December 2014
Crystal Structure of a probable thiamine pyrophosphokinase from Staphylococcus saprophyticus subsp. saprophyticus. Northeast Structural Genomics Consortium target id SyR86
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Categories: Staphylococcus saprophyticus | Acton, T B | Baran, M C | Cunningham, K | Hunt, J F | Janjua, H | Lew, S | Liu, J | Montelione, G T | Structural genomic | Owens, L | Seetharaman, J | Tong, L | Wang, D | Xiao, R | Atp binding | Kinase | Nesg | PSI, Protein structure initiative | Thiamin diphosphate biosynthetic process | Transferase
