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3lfx

From Proteopedia

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{{STRUCTURE_3lfx| PDB=3lfx | SCENE= }}
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==Structure of TM1797, a CAS1 protein from Thermotoga maritima==
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===Structure of TM1797, a CAS1 protein from Thermotoga maritima===
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<StructureSection load='3lfx' size='340' side='right' caption='[[3lfx]], [[Resolution|resolution]] 2.70&Aring;' scene=''>
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== Structural highlights ==
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==Function==
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<table><tr><td colspan='2'>[[3lfx]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LFX OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3LFX FirstGlance]. <br>
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[[http://www.uniprot.org/uniprot/Q9X2B7_THEMA Q9X2B7_THEMA]] CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. May be involved in the integration of spacer DNA into the CRISPR cassette (By similarity).[HAMAP-Rule:MF_01470]
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2yzs|2yzs]], [[3god|3god]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">SYNTHETIC GENE, TM_1797 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2336 Thermotoga maritima])</td></tr>
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==About this Structure==
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3lfx FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3lfx OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3lfx RCSB], [http://www.ebi.ac.uk/pdbsum/3lfx PDBsum]</span></td></tr>
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[[3lfx]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Thermotoga_maritima Thermotoga maritima]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3LFX OCA].
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/lf/3lfx_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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__TOC__
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</StructureSection>
[[Category: Thermotoga maritima]]
[[Category: Thermotoga maritima]]
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[[Category: Beloglazova, N.]]
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[[Category: Beloglazova, N]]
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[[Category: Chang, C.]]
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[[Category: Chang, C]]
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[[Category: Edwards, A.]]
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[[Category: Edwards, A]]
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[[Category: Joachimiak, A.]]
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[[Category: Joachimiak, A]]
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[[Category: MCSG, Midwest Center for Structural Genomics.]]
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[[Category: Structural genomic]]
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[[Category: Petit, P.]]
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[[Category: Petit, P]]
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[[Category: Savchenko, A.]]
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[[Category: Savchenko, A]]
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[[Category: Skarina, T.]]
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[[Category: Skarina, T]]
[[Category: Cas1]]
[[Category: Cas1]]
[[Category: Dnase]]
[[Category: Dnase]]
[[Category: Mcsg]]
[[Category: Mcsg]]
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[[Category: Midwest center for structural genomic]]
 
[[Category: Prokaryotic immune system]]
[[Category: Prokaryotic immune system]]
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[[Category: Protein structure initiative]]
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[[Category: PSI, Protein structure initiative]]
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[[Category: Psi-2]]
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[[Category: Structural genomic]]
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[[Category: Unknown function]]
[[Category: Unknown function]]

Revision as of 17:21, 18 December 2014

Structure of TM1797, a CAS1 protein from Thermotoga maritima

3lfx, resolution 2.70Å

Drag the structure with the mouse to rotate

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