This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


3l4e

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "3l4e" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_3l4e| PDB=3l4e | SCENE= }}
+
==1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e==
-
===1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e===
+
<StructureSection load='3l4e' size='340' side='right' caption='[[3l4e]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==About this Structure==
+
<table><tr><td colspan='2'>[[3l4e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L4E OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L4E FirstGlance]. <br>
-
[[3l4e]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Listeria_monocytogenes Listeria monocytogenes]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L4E OCA].
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">lmo0363 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1639 Listeria monocytogenes])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l4e FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l4e OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3l4e RCSB], [http://www.ebi.ac.uk/pdbsum/3l4e PDBsum]</span></td></tr>
 +
</table>
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/l4/3l4e_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
[[Category: Listeria monocytogenes]]
[[Category: Listeria monocytogenes]]
-
[[Category: Anderson, W F.]]
+
[[Category: Anderson, W F]]
-
[[Category: Brunzelle, J S.]]
+
[[Category: Brunzelle, J S]]
-
[[Category: CSGID, Center for Structural Genomics of Infectious Diseases.]]
+
[[Category: Structural genomic]]
-
[[Category: Onopriyenko, O.]]
+
[[Category: Onopriyenko, O]]
-
[[Category: Savchenko, A.]]
+
[[Category: Savchenko, A]]
-
[[Category: Center for structural genomics of infectious disease]]
+
[[Category: Csgid]]
[[Category: Csgid]]
[[Category: Department of health and human service]]
[[Category: Department of health and human service]]
Line 20: Line 35:
[[Category: Serine protease]]
[[Category: Serine protease]]
[[Category: Similar to peptidase e]]
[[Category: Similar to peptidase e]]
-
[[Category: Structural genomic]]
 

Revision as of 17:36, 18 December 2014

1.5A Crystal Structure of a Putative Peptidase E Protein from Listeria monocytogenes EGD-e

3l4e, resolution 1.50Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools