3jve

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{{STRUCTURE_3jve| PDB=3jve | SCENE= }}
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==Crystal Structure of the Sixth BRCT Domain of TopBP1==
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===Crystal Structure of the Sixth BRCT Domain of TopBP1===
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<StructureSection load='3jve' size='340' side='right' caption='[[3jve]], [[Resolution|resolution]] 1.34&Aring;' scene=''>
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{{ABSTRACT_PUBMED_19937654}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3jve]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JVE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3JVE FirstGlance]. <br>
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</td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TOPBP1, KIAA0259 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9606 Homo sapiens])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3jve FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3jve OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3jve RCSB], [http://www.ebi.ac.uk/pdbsum/3jve PDBsum]</span></td></tr>
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</table>
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== Evolutionary Conservation ==
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[[Image:Consurf_key_small.gif|200px|right]]
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Check<jmol>
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<jmolCheckbox>
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<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/jv/3jve_consurf.spt"</scriptWhenChecked>
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<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
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<text>to colour the structure by Evolutionary Conservation</text>
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</jmolCheckbox>
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</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
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<div style="clear:both"></div>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Topoisomerase IIbeta binding protein 1 (TopBP1) is a major player in the DNA damage response and interacts with a number of protein partners via its eight BRCA1 carboxy-terminal (BRCT) domains. In particular, the sixth BRCT domain of TopBP1 has been implicated in binding to the phosphorylated transcription factor, E2F1, and poly(ADP-ribose) polymerase 1 (PARP-1), where the latter interaction is responsible for the poly(ADP-ribosyl)ation of TopBP1. To gain a better understanding of the nature of TopBP1 BRCT6 interactions, we solved the crystal structure of BRCT6 to 1.34 A. The crystal structure reveals a degenerate phospho-peptide binding pocket and lacks conserved hydrophobic residues involved in packing of tandem BRCT repeats, which, together with results from phospho-peptide binding studies, strongly suggest that TopBP1 BRCT6 independently does not function as a phospho-peptide binding domain. We further provide insight into poly(ADP-ribose) binding and sites of potential modification by PARP-1.
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==Function==
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Insights from the crystal structure of the sixth BRCT domain of topoisomerase IIbeta binding protein 1.,Leung CC, Kellogg E, Kuhnert A, Hanel F, Baker D, Glover JN Protein Sci. 2010 Jan;19(1):162-7. PMID:19937654<ref>PMID:19937654</ref>
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[[http://www.uniprot.org/uniprot/TOPB1_HUMAN TOPB1_HUMAN]] Required for DNA replication. Plays a role in the rescue of stalled replication forks and checkpoint control. Binds double-stranded DNA breaks and nicks as well as single-stranded DNA. Recruits the SWI/SNF chromatin remodeling complex to E2F1-responsive promoters. Down-regulates E2F1 activity and inhibits E2F1-dependent apoptosis during G1/S transition and after DNA damage. Induces a large increase in the kinase activity of ATR.<ref>PMID:10498869</ref><ref>PMID:11395493</ref><ref>PMID:11714696</ref><ref>PMID:12697828</ref><ref>PMID:15075294</ref><ref>PMID:16530042</ref>
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==About this Structure==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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[[3jve]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3JVE OCA].
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</div>
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==Reference==
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==See Also==
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<ref group="xtra">PMID:019937654</ref><references group="xtra"/><references/>
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*[[Topoisomerase binding protein|Topoisomerase binding protein]]
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
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[[Category: Baker, D.]]
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[[Category: Baker, D]]
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[[Category: Glover, J N.M.]]
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[[Category: Glover, J N.M]]
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[[Category: Kellogg, E.]]
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[[Category: Kellogg, E]]
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[[Category: Leung, C C.]]
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[[Category: Leung, C C]]
[[Category: Brct domain]]
[[Category: Brct domain]]
[[Category: Dna binding protein]]
[[Category: Dna binding protein]]

Revision as of 17:45, 18 December 2014

Crystal Structure of the Sixth BRCT Domain of TopBP1

3jve, resolution 1.34Å

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