3l25
From Proteopedia
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- | + | ==Crystal structure of Zaire Ebola VP35 interferon inhibitory domain bound to 8 bp dsRNA== | |
- | + | <StructureSection load='3l25' size='340' side='right' caption='[[3l25]], [[Resolution|resolution]] 2.00Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[3l25]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Zaire_ebolavirus Zaire ebolavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3L25 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3L25 FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=NA:SODIUM+ION'>NA</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3fke|3fke]], [[3l26|3l26]], [[3l27|3l27]], [[3l28|3l28]], [[3l29|3l29]], [[3l2a|3l2a]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP35 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=186538 Zaire ebolavirus])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3l25 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3l25 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3l25 RCSB], [http://www.ebi.ac.uk/pdbsum/3l25 PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Ebola viral protein 35 (VP35), encoded by the highly pathogenic Ebola virus, facilitates host immune evasion by antagonizing antiviral signaling pathways, including those initiated by RIG-I-like receptors. Here we report the crystal structure of the Ebola VP35 interferon inhibitory domain (IID) bound to short double-stranded RNA (dsRNA), which together with in vivo results reveals how VP35-dsRNA interactions contribute to immune evasion. Conserved basic residues in VP35 IID recognize the dsRNA backbone, whereas the dsRNA blunt ends are 'end-capped' by a pocket of hydrophobic residues that mimic RIG-I-like receptor recognition of blunt-end dsRNA. Residues critical for RNA binding are also important for interferon inhibition in vivo but not for viral polymerase cofactor function of VP35. These results suggest that simultaneous recognition of dsRNA backbone and blunt ends provides a mechanism by which Ebola VP35 antagonizes host dsRNA sensors and immune responses. | ||
- | + | Structural basis for dsRNA recognition and interferon antagonism by Ebola VP35.,Leung DW, Prins KC, Borek DM, Farahbakhsh M, Tufariello JM, Ramanan P, Nix JC, Helgeson LA, Otwinowski Z, Honzatko RB, Basler CF, Amarasinghe GK Nat Struct Mol Biol. 2010 Feb;17(2):165-72. Epub 2010 Jan 17. PMID:20081868<ref>PMID:20081868</ref> | |
- | + | ||
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
[[Category: Zaire ebolavirus]] | [[Category: Zaire ebolavirus]] | ||
- | [[Category: Amarasinghe, G K | + | [[Category: Amarasinghe, G K]] |
- | [[Category: Basler, C F | + | [[Category: Basler, C F]] |
- | [[Category: Borek, D M | + | [[Category: Borek, D M]] |
- | [[Category: Farahbakhsh, M | + | [[Category: Farahbakhsh, M]] |
- | [[Category: Helgeson, L A | + | [[Category: Helgeson, L A]] |
- | [[Category: Honzatko, R B | + | [[Category: Honzatko, R B]] |
- | [[Category: Leung, D W | + | [[Category: Leung, D W]] |
- | [[Category: Nix, J C | + | [[Category: Nix, J C]] |
- | [[Category: Otwinowski, Z | + | [[Category: Otwinowski, Z]] |
- | [[Category: Prins, K C | + | [[Category: Prins, K C]] |
- | [[Category: Ramanan, P | + | [[Category: Ramanan, P]] |
- | [[Category: Tufariello, J M | + | [[Category: Tufariello, J M]] |
[[Category: Host cytoplasm]] | [[Category: Host cytoplasm]] | ||
[[Category: Interferon antiviral system evasion]] | [[Category: Interferon antiviral system evasion]] |
Revision as of 17:58, 18 December 2014
Crystal structure of Zaire Ebola VP35 interferon inhibitory domain bound to 8 bp dsRNA
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Categories: Zaire ebolavirus | Amarasinghe, G K | Basler, C F | Borek, D M | Farahbakhsh, M | Helgeson, L A | Honzatko, R B | Leung, D W | Nix, J C | Otwinowski, Z | Prins, K C | Ramanan, P | Tufariello, J M | Host cytoplasm | Interferon antiviral system evasion | Rna binding domain | Rna binding protein | Rna binding protein-rna complex | Rna replication | Rna-binding | Transcription | Virion