This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3nuk
From Proteopedia
(Difference between revisions)
m (Protected "3nuk" [edit=sysop:move=sysop]) |
|||
| Line 1: | Line 1: | ||
| - | + | ==THE CRYSTAL STRUCTURE OF THE W169Y mutant of ALPHA-GLUCOSIDASE (FAMILY 31) from RUMINOCOCCUS OBEUM ATCC 29174== | |
| - | + | <StructureSection load='3nuk' size='340' side='right' caption='[[3nuk]], [[Resolution|resolution]] 2.06Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | == | + | <table><tr><td colspan='2'>[[3nuk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruminococcus_obeum_atcc_29174 Ruminococcus obeum atcc 29174]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUK OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NUK FirstGlance]. <br> |
| - | [[3nuk]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Ruminococcus_obeum_atcc_29174 Ruminococcus obeum atcc 29174]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NUK OCA]. | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3n04|3n04]], [[3m6d|3m6d]], [[3mkk|3mkk]], [[3nsx|3nsx]], [[3m46|3m46]], [[3nqq|3nqq]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">RUMOBE_03919 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=411459 Ruminococcus obeum ATCC 29174])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nuk FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nuk OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nuk RCSB], [http://www.ebi.ac.uk/pdbsum/3nuk PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Evolutionary Conservation == | ||
| + | [[Image:Consurf_key_small.gif|200px|right]] | ||
| + | Check<jmol> | ||
| + | <jmolCheckbox> | ||
| + | <scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/nu/3nuk_consurf.spt"</scriptWhenChecked> | ||
| + | <scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked> | ||
| + | <text>to colour the structure by Evolutionary Conservation</text> | ||
| + | </jmolCheckbox> | ||
| + | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
| + | <div style="clear:both"></div> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Ruminococcus obeum atcc 29174]] | [[Category: Ruminococcus obeum atcc 29174]] | ||
| - | [[Category: Babnigg, G | + | [[Category: Babnigg, G]] |
| - | [[Category: Joachimiak, A | + | [[Category: Joachimiak, A]] |
| - | [[Category: Keigher, L | + | [[Category: Keigher, L]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Tan, K | + | [[Category: Tan, K]] |
| - | [[Category: Tesar, C | + | [[Category: Tesar, C]] |
| - | [[Category: Wilton, R | + | [[Category: Wilton, R]] |
[[Category: Glycosyle hydrolysis]] | [[Category: Glycosyle hydrolysis]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Mcsg]] | [[Category: Mcsg]] | ||
| - | [[Category: | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
| - | + | ||
Revision as of 06:28, 19 December 2014
THE CRYSTAL STRUCTURE OF THE W169Y mutant of ALPHA-GLUCOSIDASE (FAMILY 31) from RUMINOCOCCUS OBEUM ATCC 29174
| |||||||||||
