3nt8
From Proteopedia
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| - | + | ==Crystal Structure of Na-ASP-1== | |
| - | === | + | <StructureSection load='3nt8' size='340' side='right' caption='[[3nt8]], [[Resolution|resolution]] 2.20Å' scene=''> |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[3nt8]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Necator_americanus Necator americanus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NT8 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NT8 FirstGlance]. <br> | ||
| + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1u53|1u53]], [[1smb|1smb]], [[1cfe|1cfe]], [[1xx5|1xx5]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">asp1, Human hookworm 51031 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=51031 Necator americanus])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nt8 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nt8 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nt8 RCSB], [http://www.ebi.ac.uk/pdbsum/3nt8 PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Major proteins secreted by the infective larval stage hookworms upon host entry include Ancylostoma secreted proteins (ASPs), which are characterized by one or two CAP (cysteine-rich secretory protein/antigen 5/pathogenesis related-1) domains. The CAP domain has been reported in diverse phylogenetically unrelated proteins, but has no confirmed function. The first structure of a two-CAP-domain protein, Na-ASP-1, from the major human hookworm parasite Necator americanus was refined to a resolution limit of 2.2 A. The structure was solved by molecular replacement (MR) using Na-ASP-2, a one-CAP-domain ASP, as the search model. The correct MR solution could only be obtained by truncating the polyalanine model of Na-ASP-2 and removing several loops. The structure reveals two CAP domains linked by an extended loop. Overall, the carboxyl-terminal CAP domain is more similar to Na-ASP-2 than to the amino-terminal CAP domain. A large central cavity extends from the amino-terminal CAP domain to the carboxyl-terminal CAP domain, encompassing the putative CAP-binding cavity. The putative CAP-binding cavity is a characteristic cavity in the carboxyl-terminal CAP domain that contains a His and Glu pair. These residues are conserved in all single-CAP-domain proteins, but are absent in the amino-terminal CAP domain. The conserved His residues are oriented such that they appear to be capable of directly coordinating a zinc ion as observed for CAP proteins from reptile venoms. This first structure of a two-CAP-domain ASP can serve as a template for homology modeling of other two-CAP-domain proteins. | ||
| - | + | Structure of a two-CAP-domain protein from the human hookworm parasite Necator americanus.,Asojo OA Acta Crystallogr D Biol Crystallogr. 2011 May;67(Pt 5):455-62. Epub 2011, Apr 7. PMID:21543848<ref>PMID:21543848</ref> | |
| - | + | ||
| - | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | + | </div> | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Necator americanus]] | [[Category: Necator americanus]] | ||
| - | [[Category: Asojo, O A | + | [[Category: Asojo, O A]] |
[[Category: Cap domain]] | [[Category: Cap domain]] | ||
[[Category: Cysteine-rich secretory protein]] | [[Category: Cysteine-rich secretory protein]] | ||
[[Category: Immune system]] | [[Category: Immune system]] | ||
[[Category: Pathogenesis related-1 protein]] | [[Category: Pathogenesis related-1 protein]] | ||
Revision as of 06:47, 19 December 2014
Crystal Structure of Na-ASP-1
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