3pkv
From Proteopedia
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| - | + | ==Crystal Structure of Toxoflavin Lyase (TflA)== | |
| - | === | + | <StructureSection load='3pkv' size='340' side='right' caption='[[3pkv]], [[Resolution|resolution]] 1.34Å' scene=''> |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[3pkv]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Paenibacillus_polymyxa Paenibacillus polymyxa]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3PKV OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3PKV FirstGlance]. <br> | ||
| + | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3pkw|3pkw]], [[3pkx|3pkx]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">tflA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=1406 Paenibacillus polymyxa])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3pkv FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3pkv OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3pkv RCSB], [http://www.ebi.ac.uk/pdbsum/3pkv PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | High resolution crystal structures are reported for apo, holo, and substrate-bound forms of a toxoflavin-degrading metalloenzyme (TflA). In addition, the degradation reaction is shown to be dependent on oxygen, Mn(II), and dithiothreitol <i>in vitro</i>. Despite its low sequence identity with proteins of known structure, TflA is structurally homologous to proteins of the vicinal oxygen chelate superfamily. Like other metalloenzymes in this superfamily, the TflA fold contains four modules that associate to form a metal binding site; however, the fold displays a rare rearrangement of the structural modules indicative of domain permutation. Moreover, unlike the 2-His-1-carboxylate facial triad commonly utilized by vicinal oxygen chelate dioxygenases and other dioxygen-activating non-heme Fe(II) enzymes, the metal center in TflA consists of a 1-His-2-carboxylate facial triad. The substrate-bound complex shows square-pyramidal geometry in which one position is occupied by O5 of toxoflavin. The open coordination site is predicted to be the dioxygen binding site. TflA appears to stabilize the reduced form of toxoflavin through second-sphere interactions. This anionic species is predicted to be the electron source responsible for reductive activation of oxygen to produce a peroxytoxoflavin intermediate.<i> | ||
| - | + | Toxoflavin Lyase Requires a Novel 1-His-2-Carboxylate Facial Triad.,Fenwick MK, Philmus B, Begley TP, Ealick SE Biochemistry. 2010 Dec 17. PMID:21166463<ref>PMID:21166463</ref> | |
| - | + | ||
| - | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | + | </div> | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Paenibacillus polymyxa]] | [[Category: Paenibacillus polymyxa]] | ||
| - | [[Category: Begley, T P | + | [[Category: Begley, T P]] |
| - | [[Category: Ealick, S E | + | [[Category: Ealick, S E]] |
| - | [[Category: Fenwick, M K | + | [[Category: Fenwick, M K]] |
| - | [[Category: Philmus, B | + | [[Category: Philmus, B]] |
[[Category: Lyase]] | [[Category: Lyase]] | ||
[[Category: Metalloenzyme]] | [[Category: Metalloenzyme]] | ||
[[Category: Vicinal oxygen chelate superfamily]] | [[Category: Vicinal oxygen chelate superfamily]] | ||
Revision as of 10:35, 19 December 2014
Crystal Structure of Toxoflavin Lyase (TflA)
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