3qp2
From Proteopedia
(Difference between revisions)
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| - | + | ==Crystal structure of CviR ligand-binding domain bound to C8-HSL== | |
| - | + | <StructureSection load='3qp2' size='340' side='right' caption='[[3qp2]], [[Resolution|resolution]] 1.64Å' scene=''> | |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[3qp2]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chromobacterium_violaceum Chromobacterium violaceum]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3QP2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3QP2 FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=HTF:N-(2-OXOTETRAHYDROFURAN-3-YL)OCTANAMIDE'>HTF</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3qp1|3qp1]], [[3qp4|3qp4]], [[3qp5|3qp5]], [[3qp6|3qp6]], [[3qp7|3qp7]], [[3qp8|3qp8]]</td></tr> | ||
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">cviR ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=536 Chromobacterium violaceum])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3qp2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3qp2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3qp2 RCSB], [http://www.ebi.ac.uk/pdbsum/3qp2 PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Quorum-sensing bacteria communicate via small molecules called autoinducers to coordinate collective behaviors. Because quorum sensing controls virulence factor expression in many clinically relevant pathogens, membrane-permeable quorum sensing antagonists that prevent population-wide expression of virulence genes offer a potential route to novel antibacterial therapeutics. Here, we report a strategy for inhibiting quorum-sensing receptors of the widespread LuxR family. Structure-function studies with natural and synthetic ligands demonstrate that the dimeric LuxR-type transcription factor CviR from Chromobacterium violaceum is potently antagonized by molecules that bind in place of the native acylated homoserine lactone autoinducer, provided that they stabilize a closed conformation. In such conformations, each of the two DNA-binding domains interacts with the ligand-binding domain of the opposing monomer. Consequently, the DNA-binding helices are held apart by approximately 60 A, twice the approximately 30 A separation required for operator binding. This approach may represent a general strategy for the inhibition of multidomain proteins. | ||
| - | + | A strategy for antagonizing quorum sensing.,Chen G, Swem LR, Swem DL, Stauff DL, O'Loughlin CT, Jeffrey PD, Bassler BL, Hughson FM Mol Cell. 2011 Apr 22;42(2):199-209. PMID:21504831<ref>PMID:21504831</ref> | |
| - | + | ||
| - | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | + | </div> | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Chromobacterium violaceum]] | [[Category: Chromobacterium violaceum]] | ||
| - | [[Category: Bassler, B | + | [[Category: Bassler, B]] |
| - | [[Category: Chen, G | + | [[Category: Chen, G]] |
| - | [[Category: Hughson, F | + | [[Category: Hughson, F]] |
| - | [[Category: Jeffrey, P | + | [[Category: Jeffrey, P]] |
| - | [[Category: Loughlin, C O | + | [[Category: Loughlin, C O]] |
| - | [[Category: Stauff, D | + | [[Category: Stauff, D]] |
| - | [[Category: Swem, D | + | [[Category: Swem, D]] |
| - | [[Category: Swem, L | + | [[Category: Swem, L]] |
[[Category: Acylated homoserine lactone]] | [[Category: Acylated homoserine lactone]] | ||
[[Category: Agonist]] | [[Category: Agonist]] | ||
Revision as of 10:59, 19 December 2014
Crystal structure of CviR ligand-binding domain bound to C8-HSL
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Categories: Chromobacterium violaceum | Bassler, B | Chen, G | Hughson, F | Jeffrey, P | Loughlin, C O | Stauff, D | Swem, D | Swem, L | Acylated homoserine lactone | Agonist | Antagonist | Dna binding protein | Ligand binding domain | Luxr | N-hexanoyl-l-homoserine lactone | Quorum sensing | Signal receptor | Transcription | Transcription activator | Transcription factor
