3uv9
From Proteopedia
(Difference between revisions)
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- | + | ==Structure of the rhesus monkey TRIM5alpha deltav1 PRYSPRY domain== | |
- | + | <StructureSection load='3uv9' size='340' side='right' caption='[[3uv9]], [[Resolution|resolution]] 1.55Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[3uv9]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Macaca_mulatta Macaca mulatta]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3UV9 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3UV9 FirstGlance]. <br> | ||
+ | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2lm3|2lm3]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">TRIM5 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=9544 Macaca mulatta])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3uv9 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3uv9 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3uv9 RCSB], [http://www.ebi.ac.uk/pdbsum/3uv9 PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Tripartite motif protein TRIM5alpha blocks retroviral replication after cell entry, and species-specific differences in its activity are determined by sequence variations within the C-terminal B30.2/PRYSPRY domain. Here we report a high-resolution structure of a TRIM5alpha PRYSPRY domain, the PRYSPRY of the rhesus monkey TRIM5alpha that potently restricts HIV infection, and identify features involved in its interaction with the HIV capsid. The extensive capsid-binding interface maps on the structurally divergent face of the protein formed by hypervariable loop segments, confirming that TRIM5alpha evolution is largely determined by its binding specificity. Interactions with the capsid are mediated by flexible variable loops via a mechanism that parallels antigen recognition by IgM antibodies, a similarity that may help explain some of the unusual functional properties of TRIM5alpha. Distinctive features of this pathogen-recognition interface, such as structural plasticity conferred by the mobile v1 segment and interaction with multiple epitopes, may allow restriction of divergent retroviruses and increase resistance to capsid mutations. | ||
- | + | Structure of the rhesus monkey TRIM5alpha PRYSPRY domain, the HIV capsid recognition module.,Biris N, Yang Y, Taylor AB, Tomashevski A, Guo M, Hart PJ, Diaz-Griffero F, Ivanov DN Proc Natl Acad Sci U S A. 2012 Aug 14;109(33):13278-83. doi:, 10.1073/pnas.1203536109. Epub 2012 Jul 30. PMID:22847415<ref>PMID:22847415</ref> | |
- | + | ||
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | == | + | <references/> |
- | + | __TOC__ | |
+ | </StructureSection> | ||
[[Category: Macaca mulatta]] | [[Category: Macaca mulatta]] | ||
- | [[Category: Biris, N | + | [[Category: Biris, N]] |
- | [[Category: Diaz-Griffero, F | + | [[Category: Diaz-Griffero, F]] |
- | [[Category: Guo, M | + | [[Category: Guo, M]] |
- | [[Category: Hart, P J | + | [[Category: Hart, P J]] |
- | [[Category: Ivanov, D | + | [[Category: Ivanov, D]] |
- | [[Category: Taylor, A B | + | [[Category: Taylor, A B]] |
- | [[Category: Tomashevskii, A | + | [[Category: Tomashevskii, A]] |
- | [[Category: Yang, Y | + | [[Category: Yang, Y]] |
[[Category: Antiretroviral]] | [[Category: Antiretroviral]] | ||
[[Category: Domain swap]] | [[Category: Domain swap]] | ||
[[Category: Hiv capsid]] | [[Category: Hiv capsid]] | ||
[[Category: Ligase]] | [[Category: Ligase]] |
Revision as of 06:39, 21 December 2014
Structure of the rhesus monkey TRIM5alpha deltav1 PRYSPRY domain
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Categories: Macaca mulatta | Biris, N | Diaz-Griffero, F | Guo, M | Hart, P J | Ivanov, D | Taylor, A B | Tomashevskii, A | Yang, Y | Antiretroviral | Domain swap | Hiv capsid | Ligase