3u8n
From Proteopedia
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| - | + | ==Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3950 (1-(6-bromo-5-ethoxypyridin-3-yl)-1,4-diazepane)== | |
| - | + | <StructureSection load='3u8n' size='340' side='right' caption='[[3u8n]], [[Resolution|resolution]] 2.35Å' scene=''> | |
| - | + | == Structural highlights == | |
| + | <table><tr><td colspan='2'>[[3u8n]] is a 20 chain structure with sequence from [http://en.wikipedia.org/wiki/Lymnaea_stagnalis Lymnaea stagnalis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3U8N OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3U8N FirstGlance]. <br> | ||
| + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=09S:1-(6-BROMO-5-ETHOXYPYRIDIN-3-YL)-1,4-DIAZEPANE'>09S</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr> | ||
| + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3u8j|3u8j]], [[3u8k|3u8k]], [[3u8l|3u8l]], [[3u8m|3u8m]], [[1uw6|1uw6]], [[1uv6|1uv6]]</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3u8n FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3u8n OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3u8n RCSB], [http://www.ebi.ac.uk/pdbsum/3u8n PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | The alpha4beta2 subtype of the nicotinic acetylcholine receptor has been pursued as a drug target for treatment of psychiatric and neurodegenerative disorders and smoking cessation aids for decades. Still, a thorough understanding of structure-function relationships of alpha4beta2 agonists is lacking. Using binding experiments, electrophysiology and x-ray crystallography we have investigated a consecutive series of five prototypical pyridine-containing agonists derived from 1-(pyridin-3-yl)-1,4-diazepane. A correlation between binding affinities at alpha4beta2 and the acetylcholine-binding protein from Lymnaea stagnalis (Ls-AChBP) confirms Ls-AChBP as structural surrogate for alpha4beta2 receptors. Crystal structures of five agonists with efficacies at alpha4beta2 from 21-76% were determined in complex with Ls-AChBP. No variation in closure of loop C is observed despite large efficacy variations. Instead, the efficacy of a compound appears tightly coupled to its ability to form a strong intersubunit bridge linking the primary and complementary binding interfaces. For the tested agonists, a specific halogen bond was observed to play a large role in establishing such strong intersubunit anchoring. | ||
| - | + | Intersubunit bridge formation governs agonist efficacy at nicotinic acetylcholine alpha4beta2 receptors: unique role of halogen bonding revealed.,Rohde LA, Ahring PK, Jensen ML, Nielsen EO, Peters D, Helgstrand C, Krintel C, Harpsoe K, Gajhede M, Kastrup JS, Balle T J Biol Chem. 2012 Feb 3;287(6):4248-59. Epub 2011 Dec 13. PMID:22170047<ref>PMID:22170047</ref> | |
| - | + | ||
| - | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
| - | + | </div> | |
| - | == | + | ==See Also== |
| - | + | *[[Acetylcholine binding protein|Acetylcholine binding protein]] | |
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Lymnaea stagnalis]] | [[Category: Lymnaea stagnalis]] | ||
| - | [[Category: Ahring, P K | + | [[Category: Ahring, P K]] |
| - | [[Category: Balle, T | + | [[Category: Balle, T]] |
| - | [[Category: Gajhede, M | + | [[Category: Gajhede, M]] |
| - | [[Category: Harpsoe, K | + | [[Category: Harpsoe, K]] |
[[Category: Helgstrand, C]] | [[Category: Helgstrand, C]] | ||
| - | [[Category: Jensen, M L | + | [[Category: Jensen, M L]] |
| - | [[Category: Kastrup, J S | + | [[Category: Kastrup, J S]] |
| - | [[Category: Krintel, C | + | [[Category: Krintel, C]] |
| - | [[Category: Nielsen, E O | + | [[Category: Nielsen, E O]] |
| - | [[Category: Peters, D | + | [[Category: Peters, D]] |
| - | [[Category: Rohde, L A.H | + | [[Category: Rohde, L A.H]] |
[[Category: Acetylcholine]] | [[Category: Acetylcholine]] | ||
[[Category: Acetylcholine-binding protein]] | [[Category: Acetylcholine-binding protein]] | ||
Revision as of 06:51, 21 December 2014
Crystal structure of the acetylcholine binding protein (AChBP) from Lymnaea stagnalis in complex with NS3950 (1-(6-bromo-5-ethoxypyridin-3-yl)-1,4-diazepane)
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Categories: Lymnaea stagnalis | Ahring, P K | Balle, T | Gajhede, M | Harpsoe, K | Helgstrand, C | Jensen, M L | Kastrup, J S | Krintel, C | Nielsen, E O | Peters, D | Rohde, L A.H | Acetylcholine | Acetylcholine-binding protein | Acetylcholine-binding protein-agonist complex | Agonist | Ligand-bindig domain | Lymnaea stagnali
