4h53

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{{STRUCTURE_4h53| PDB=4h53 | SCENE= }}
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==Influenza N2-Tyr406Asp neuraminidase in complex with beta-Neu5Ac==
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===Influenza N2-Tyr406Asp neuraminidase in complex with beta-Neu5Ac===
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<StructureSection load='4h53' size='340' side='right' caption='[[4h53]], [[Resolution|resolution]] 1.50&Aring;' scene=''>
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{{ABSTRACT_PUBMED_23422659}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4h53]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Influenza_a_virus_(a/ri/5+/1957(h2n2)) Influenza a virus (a/ri/5+/1957(h2n2))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H53 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4H53 FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BMA:BETA-D-MANNOSE'>BMA</scene>, <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=SLB:5-N-ACETYL-BETA-D-NEURAMINIC+ACID'>SLB</scene>, <scene name='pdbligand=GAL:BETA-D-GALACTOSE'>GAL</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene></td></tr>
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<tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=SIA:O-SIALIC+ACID'>SIA</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4h52|4h52]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4h53 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4h53 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4h53 RCSB], [http://www.ebi.ac.uk/pdbsum/4h53 PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Development of novel influenza neuraminidase inhibitors is critical for preparedness against influenza outbreaks. Knowledge of the neuraminidase enzymatic mechanism and transition-state analogue, 2-deoxy-2,3-didehydro-N-acetylneuraminic acid, contributed to the development of the first generation anti-neuraminidase drugs, zanamivir and oseltamivir. However, lack of evidence regarding influenza neuraminidase key catalytic residues has limited strategies for novel neuraminidase inhibitor design. Here, we confirm that influenza neuraminidase conserved Tyr406 is the key catalytic residue that may function as a nucleophile; thus, mechanism-based covalent inhibition of influenza neuraminidase was conceived. Crystallographic studies reveal that 2alpha,3ax-difluoro-N-acetylneuraminic acid forms a covalent bond with influenza neuraminidase Tyr406 and the compound was found to possess potent anti-influenza activity against both influenza A and B viruses. Our results address many unanswered questions about the influenza neuraminidase catalytic mechanism and demonstrate that covalent inhibition of influenza neuraminidase is a promising and novel strategy for the development of next-generation influenza drugs.
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==About this Structure==
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Influenza neuraminidase operates via a nucleophilic mechanism and can be targeted by covalent inhibitors.,Vavricka CJ, Liu Y, Kiyota H, Sriwilaijaroen N, Qi J, Tanaka K, Wu Y, Li Q, Li Y, Yan J, Suzuki Y, Gao GF Nat Commun. 2013;4:1491. doi: 10.1038/ncomms2487. PMID:23422659<ref>PMID:23422659</ref>
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[[4h53]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Influenza_a_virus_(a/ri/5+/1957(h2n2)) Influenza a virus (a/ri/5+/1957(h2n2))]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4H53 OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:023422659</ref><references group="xtra"/><references/>
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</div>
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[[Category: Gao, G F.]]
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[[Category: Kiyota, H.]]
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==See Also==
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[[Category: Li, Q.]]
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*[[Neuraminidase|Neuraminidase]]
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[[Category: Li, Y.]]
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== References ==
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[[Category: Liu, Y.]]
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<references/>
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[[Category: Qi, J.]]
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__TOC__
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[[Category: Sriwilaijaroen, N.]]
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</StructureSection>
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[[Category: Suzuki, Y.]]
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[[Category: Gao, G F]]
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[[Category: Tanaka, K.]]
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[[Category: Kiyota, H]]
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[[Category: Vavricka, C J.]]
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[[Category: Li, Q]]
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[[Category: Wu, Y.]]
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[[Category: Li, Y]]
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[[Category: Yan, J.]]
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[[Category: Liu, Y]]
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[[Category: Qi, J]]
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[[Category: Sriwilaijaroen, N]]
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[[Category: Suzuki, Y]]
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[[Category: Tanaka, K]]
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[[Category: Vavricka, C J]]
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[[Category: Wu, Y]]
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[[Category: Yan, J]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Influenza virus surface]]
[[Category: Influenza virus surface]]
[[Category: Neuraminidase]]
[[Category: Neuraminidase]]

Revision as of 11:21, 21 December 2014

Influenza N2-Tyr406Asp neuraminidase in complex with beta-Neu5Ac

4h53, resolution 1.50Å

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