4fyc

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{{STRUCTURE_4fyc| PDB=4fyc | SCENE= }}
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==Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori==
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===Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori===
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<StructureSection load='4fyc' size='340' side='right' caption='[[4fyc]], [[Resolution|resolution]] 2.31&Aring;' scene=''>
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{{ABSTRACT_PUBMED_23633582}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[4fyc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FYC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4FYC FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PG4:TETRAETHYLENE+GLYCOL'>PG4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4fyb|4fyb]]</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">HP_0377 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=85962 Helicobacter pylori 26695])</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4fyc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4fyc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4fyc RCSB], [http://www.ebi.ac.uk/pdbsum/4fyc PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Maturation of cytochrome c is carried out in the bacterial periplasm, where specialized thiol-disulfide oxidoreductases provide the correct reduction of oxidized apocytochrome c before covalent haem attachment. HP0377 from Helicobacter pylori is a thioredoxin-fold protein that has been implicated as a component of system II for cytochrome c assembly and shows limited sequence similarity to Escherichia coli DsbC, a disulfide-bond isomerase. To better understand the role of HP0377, its crystal structures have been determined in both reduced and partially oxidized states, which are highly similar to each other. Sedimentation-equilibrium experiments indicate that HP0377 is monomeric in solution. HP0377 adopts a thioredoxin fold but shows distinctive variations as in other thioredoxin-like bacterial periplasmic proteins. The active site of HP0377 closely resembles that of E. coli DsbC. A reductase assay suggests that HP0377 may play a role as a reductase in the biogenesis of holocytochrome c553 (HP1227). Binding experiments indicate that it can form a covalent complex with HP0518, a putative L,D-transpeptidase with a catalytic cysteine residue, via a disulfide bond. Furthermore, physicochemical properties of HP0377 and its R86A variant have been determined. These results suggest that HP0377 may perform multiple functions as a reductase in H. pylori.
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==About this Structure==
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Structural and functional characterization of HP0377, a thioredoxin-fold protein from Helicobacter pylori.,Yoon JY, Kim J, An DR, Lee SJ, Kim HS, Im HN, Yoon HJ, Kim JY, Kim SJ, Han BW, Suh SW Acta Crystallogr D Biol Crystallogr. 2013 May;69(Pt 5):735-46. doi:, 10.1107/S0907444913001236. Epub 2013 Apr 11. PMID:23633582<ref>PMID:23633582</ref>
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[[4fyc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Helicobacter_pylori_26695 Helicobacter pylori 26695]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4FYC OCA].
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==Reference==
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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<ref group="xtra">PMID:023633582</ref><references group="xtra"/><references/>
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</div>
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== References ==
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<references/>
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__TOC__
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</StructureSection>
[[Category: Helicobacter pylori 26695]]
[[Category: Helicobacter pylori 26695]]
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[[Category: An, D R.]]
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[[Category: An, D R]]
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[[Category: Han, B W.]]
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[[Category: Han, B W]]
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[[Category: Im, H N.]]
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[[Category: Im, H N]]
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[[Category: Kim, H S.]]
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[[Category: Kim, H S]]
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[[Category: Kim, J.]]
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[[Category: Kim, J]]
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[[Category: Kim, J Y.]]
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[[Category: Kim, J Y]]
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[[Category: Kim, S.]]
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[[Category: Kim, S]]
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[[Category: Lee, S J.]]
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[[Category: Lee, S J]]
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[[Category: Suh, S W.]]
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[[Category: Suh, S W]]
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[[Category: Yoon, H.]]
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[[Category: Yoon, H]]
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[[Category: Yoon, J Y.]]
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[[Category: Yoon, J Y]]
[[Category: Oxidoreductase]]
[[Category: Oxidoreductase]]
[[Category: Reductase]]
[[Category: Reductase]]
[[Category: Thioredoxin fold]]
[[Category: Thioredoxin fold]]

Revision as of 11:45, 21 December 2014

Structural and functional characterizations of a thioredoxin-fold protein from Helicobacter pylori

4fyc, resolution 2.31Å

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