4knc
From Proteopedia
(Difference between revisions)
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- | + | ==Structural and functional characterization of Pseudomonas aeruginosa AlgX== | |
- | + | <StructureSection load='4knc' size='340' side='right' caption='[[4knc]], [[Resolution|resolution]] 2.14Å' scene=''> | |
- | + | == Structural highlights == | |
+ | <table><tr><td colspan='2'>[[4knc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Pseudomonas_aeruginosa_pao1 Pseudomonas aeruginosa pao1]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4KNC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4KNC FirstGlance]. <br> | ||
+ | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">algX, PA3546 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=208964 Pseudomonas aeruginosa PAO1])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4knc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4knc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4knc RCSB], [http://www.ebi.ac.uk/pdbsum/4knc PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The exopolysaccharide alginate, produced by mucoid Pseudomonas aeruginosa in the lungs of cystic fibrosis patients, undergoes two different chemical modifications as it is synthesized that alter the properties of the polymer and hence the biofilm. One modification, acetylation, causes the cells in the biofilm to adhere better to lung epithelium, form microcolonies, and resist the effects of the host immune system and/or antibiotics. Alginate biosynthesis requires twelve proteins encoded by the algD operon, including AlgX, and while this protein is essential for polymer production, its exact role is unknown. In this study we present the X-ray crystal structure of AlgX at 2.15 A resolution. The structure reveals that AlgX is a two-domain protein, with an N-terminal domain with structural homology to members of the SGNH hydrolase superfamily and a C-terminal carbohydrate-binding module (CBM). A number of residues in the CBM form a substrate-recognition ''pinch point'' that we propose aids in alginate binding and orientation. Although the topology of the N-terminal domain deviates from canonical SGNH hydrolases, the residues that constitute the Ser-His-Asp catalytic triad characteristic of this family are structurally conserved. In vivo studies reveal that site-specific mutation of these residues results in non-acetylated alginate. This catalytic triad is also required for acetyl esterase activity in vitro. Our data suggest that not only does AlgX protect the polymer as it passages through the periplasm but that it also plays a role in alginate acetylation. Our results provide the first structural insight for a wide group of closely-related bacterial polysaccharide acetyltransferases. | ||
- | + | Structural and functional characterization of Pseudomonas aeruginosa AlgX: role of AlgX in alginate acetylation.,Riley LM, Weadge JT, Baker P, Robinson H, Codee JD, Tipton PA, Ohman DE, Howell PL J Biol Chem. 2013 Jun 18. PMID:23779107<ref>PMID:23779107</ref> | |
- | + | ||
- | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
- | + | </div> | |
+ | == References == | ||
+ | <references/> | ||
+ | __TOC__ | ||
+ | </StructureSection> | ||
[[Category: Pseudomonas aeruginosa pao1]] | [[Category: Pseudomonas aeruginosa pao1]] | ||
- | [[Category: Baker, P | + | [[Category: Baker, P]] |
- | [[Category: Codee, J D.C | + | [[Category: Codee, J D.C]] |
- | [[Category: Howell, P L | + | [[Category: Howell, P L]] |
- | [[Category: Ohman, D E | + | [[Category: Ohman, D E]] |
- | [[Category: Riley, L M | + | [[Category: Riley, L M]] |
- | [[Category: Robinson, H | + | [[Category: Robinson, H]] |
- | [[Category: Tipton, P A | + | [[Category: Tipton, P A]] |
- | [[Category: Weadge, J T | + | [[Category: Weadge, J T]] |
[[Category: Alginate acetylation]] | [[Category: Alginate acetylation]] | ||
[[Category: Carbohydrate-binding domain]] | [[Category: Carbohydrate-binding domain]] | ||
[[Category: Sgnh hydrolase]] | [[Category: Sgnh hydrolase]] | ||
[[Category: Sugar binding protein]] | [[Category: Sugar binding protein]] |
Revision as of 14:44, 21 December 2014
Structural and functional characterization of Pseudomonas aeruginosa AlgX
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