4lwp

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{STRUCTURE_4lwp| PDB=4lwp | SCENE= }}
+
==Crystal structure of PRMT6-SAH==
-
===Crystal structure of PRMT6-SAH===
+
<StructureSection load='4lwp' size='340' side='right' caption='[[4lwp]], [[Resolution|resolution]] 2.35&Aring;' scene=''>
-
{{ABSTRACT_PUBMED_24498306}}
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[4lwp]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Tryb2 Tryb2]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LWP OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4LWP FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SAH:S-ADENOSYL-L-HOMOCYSTEINE'>SAH</scene></td></tr>
 +
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4lwo|4lwo]]</td></tr>
 +
<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Tb927.5.3960 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=999953 TRYB2])</td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4lwp FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4lwp OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4lwp RCSB], [http://www.ebi.ac.uk/pdbsum/4lwp PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
Arginine methylation plays vital roles in the cellular functions of the protozoan Trypanosoma brucei. The T. brucei arginine methyltransferase 6 (TbPRMT6) is a type I arginine methyltransferase homologous to human PRMT6. In this study, we report the crystal structures of apo-TbPRMT6 and its complex with the reaction product S-adenosyl-homocysteine (SAH). The structure of apo-TbPRMT6 displays several features that are different from those of type I PRMTs that were structurally characterized previously, including four stretches of insertion, the absence of strand beta15, and a distinct dimerization arm. The comparison of the apo-TbPRMT6 and SAH-TbPRMT6 structures revealed the fine rearrangements in the active site upon SAH binding. The isothermal titration calorimetry results demonstrated that SAH binding greatly increases the affinity of TbPRMT6 to a substrate peptide derived from bovine histone H4. The western blotting and mass spectrometry results revealed that TbPRMT6 methylates bovine histone H4 tail at arginine 3 but cannot methylate several T. brucei histone tails. In summary, our results highlight the structural differences between TbPRMT6 and other type I PRMTs and reveal that the active site rearrangement upon SAH binding is important for the substrate binding of TbPRMT6.
-
==About this Structure==
+
Crystal Structure of Arginine Methyltransferase 6 from Trypanosoma brucei.,Wang C, Zhu Y, Chen J, Li X, Peng J, Chen J, Zou Y, Zhang Z, Jin H, Yang P, Wu J, Niu L, Gong Q, Teng M, Shi Y PLoS One. 2014 Feb 3;9(2):e87267. doi: 10.1371/journal.pone.0087267. eCollection , 2014. PMID:24498306<ref>PMID:24498306</ref>
-
[[4lwp]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4LWP OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:024498306</ref><references group="xtra"/><references/>
+
</div>
-
[[Category: Shi, Y.]]
+
== References ==
-
[[Category: Teng, M.]]
+
<references/>
-
[[Category: Wang, C.]]
+
__TOC__
-
[[Category: Zhu, Y.]]
+
</StructureSection>
 +
[[Category: Tryb2]]
 +
[[Category: Shi, Y]]
 +
[[Category: Teng, M]]
 +
[[Category: Wang, C]]
 +
[[Category: Zhu, Y]]
[[Category: Arginine methylation]]
[[Category: Arginine methylation]]
[[Category: Sam binding domain]]
[[Category: Sam binding domain]]
[[Category: Transferase]]
[[Category: Transferase]]

Revision as of 18:45, 21 December 2014

Crystal structure of PRMT6-SAH

4lwp, resolution 2.35Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools