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1vk5
From Proteopedia
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| - | [[Image:1vk5.gif|left|200px]] | + | [[Image:1vk5.gif|left|200px]] |
| - | + | ||
| - | '''X-ray Structure of Gene Product from Arabidopsis Thaliana At3g22680''' | + | {{Structure |
| + | |PDB= 1vk5 |SIZE=350|CAPTION= <scene name='initialview01'>1vk5</scene>, resolution 1.604Å | ||
| + | |SITE= <scene name='pdbsite=AC1:So4+Binding+Site+For+Residue+A+300'>AC1</scene>, <scene name='pdbsite=AC2:So4+Binding+Site+For+Residue+A+301'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+302'>AC3</scene>, <scene name='pdbsite=AC4:Cps+Binding+Site+For+Residue+A+200'>AC4</scene>, <scene name='pdbsite=AC5:Edo+Binding+Site+For+Residue+A+401'>AC5</scene>, <scene name='pdbsite=AC6:Edo+Binding+Site+For+Residue+A+402'>AC6</scene>, <scene name='pdbsite=AC7:Edo+Binding+Site+For+Residue+A+403'>AC7</scene> and <scene name='pdbsite=AC8:Edo+Binding+Site+For+Residue+A+404'>AC8</scene> | ||
| + | |LIGAND= <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=CPS:3-[(3-CHOLAMIDOPROPYL)DIMETHYLAMMONIO]-1-PROPANESULFONATE'>CPS</scene> and <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene> | ||
| + | |ACTIVITY= | ||
| + | |GENE= At3g22680 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 Arabidopsis thaliana]) | ||
| + | }} | ||
| + | |||
| + | '''X-ray Structure of Gene Product from Arabidopsis Thaliana At3g22680''' | ||
| + | |||
==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
| - | 1VK5 is a [ | + | 1VK5 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Arabidopsis_thaliana Arabidopsis thaliana]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VK5 OCA]. |
==Reference== | ==Reference== | ||
| - | Structure at 1.6 A resolution of the protein from gene locus At3g22680 from Arabidopsis thaliana., Allard ST, Bingman CA, Johnson KA, Wesenberg GE, Bitto E, Jeon WB, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jul 1;61(Pt, 7):647-50. Epub 2005 Jun 30. PMID:[http:// | + | Structure at 1.6 A resolution of the protein from gene locus At3g22680 from Arabidopsis thaliana., Allard ST, Bingman CA, Johnson KA, Wesenberg GE, Bitto E, Jeon WB, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jul 1;61(Pt, 7):647-50. Epub 2005 Jun 30. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/16511118 16511118] |
[[Category: Arabidopsis thaliana]] | [[Category: Arabidopsis thaliana]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
| Line 23: | Line 32: | ||
[[Category: EDO]] | [[Category: EDO]] | ||
[[Category: SO4]] | [[Category: SO4]] | ||
| - | [[Category: center for eukaryotic structural | + | [[Category: center for eukaryotic structural genomic]] |
[[Category: cesg]] | [[Category: cesg]] | ||
[[Category: protein structure initiative]] | [[Category: protein structure initiative]] | ||
[[Category: psi]] | [[Category: psi]] | ||
| - | [[Category: structural | + | [[Category: structural genomic]] |
[[Category: unknown function]] | [[Category: unknown function]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:46:42 2008'' |
Revision as of 12:46, 20 March 2008
| |||||||
| , resolution 1.604Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , , , and | ||||||
| Ligands: | , and | ||||||
| Gene: | At3g22680 (Arabidopsis thaliana) | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
X-ray Structure of Gene Product from Arabidopsis Thaliana At3g22680
Overview
The gene product of At3g22680 from Arabidopsis thaliana codes for a protein of unknown function. The crystal structure of the At3g22680 gene product was determined by multiple-wavelength anomalous diffraction and refined to an R factor of 16.0% (Rfree = 18.4%) at 1.60 A resolution. The refined structure shows one monomer in the asymmetric unit, with one molecule of the non-denaturing detergent CHAPS {3-[(3-cholamidopropyl)dimethylammonio]-1-propane sulfonate} tightly bound. Protein At3g22680 shows no structural homology to any other known proteins and represents a new fold in protein conformation space.
About this Structure
1VK5 is a Single protein structure of sequence from Arabidopsis thaliana. Full crystallographic information is available from OCA.
Reference
Structure at 1.6 A resolution of the protein from gene locus At3g22680 from Arabidopsis thaliana., Allard ST, Bingman CA, Johnson KA, Wesenberg GE, Bitto E, Jeon WB, Phillips GN Jr, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2005 Jul 1;61(Pt, 7):647-50. Epub 2005 Jun 30. PMID:16511118
Page seeded by OCA on Thu Mar 20 14:46:42 2008
Categories: Arabidopsis thaliana | Single protein | Allard, S T.M. | Bingman, C A. | CESG, Center for Eukaryotic Structural Genomics. | Johnson, K A. | Jr., G N.Phillips. | Smith, D W. | Wesenberg, G E. | CPS | EDO | SO4 | Center for eukaryotic structural genomic | Cesg | Protein structure initiative | Psi | Structural genomic | Unknown function
