1w39

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[[Image:1w39.gif|left|200px]]<br /><applet load="1w39" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:1w39.gif|left|200px]]
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caption="1w39, resolution 3.75&Aring;" />
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'''CRYSTAL STRUCTURE OF AN ARTIFICIAL TOP COMPONENT OF TURNIP YELLOW MOSAIC VIRUS'''<br />
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{{Structure
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|PDB= 1w39 |SIZE=350|CAPTION= <scene name='initialview01'>1w39</scene>, resolution 3.75&Aring;
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|SITE=
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|LIGAND=
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|ACTIVITY=
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|GENE=
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}}
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'''CRYSTAL STRUCTURE OF AN ARTIFICIAL TOP COMPONENT OF TURNIP YELLOW MOSAIC VIRUS'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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1W39 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Turnip_yellow_mosaic_virus Turnip yellow mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W39 OCA].
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1W39 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Turnip_yellow_mosaic_virus Turnip yellow mosaic virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1W39 OCA].
==Reference==
==Reference==
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Crystal structure of an empty capsid of turnip yellow mosaic virus., van Roon AM, Bink HH, Plaisier JR, Pleij CW, Abrahams JP, Pannu NS, J Mol Biol. 2004 Aug 27;341(5):1205-14. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=15321716 15321716]
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Crystal structure of an empty capsid of turnip yellow mosaic virus., van Roon AM, Bink HH, Plaisier JR, Pleij CW, Abrahams JP, Pannu NS, J Mol Biol. 2004 Aug 27;341(5):1205-14. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/15321716 15321716]
[[Category: Single protein]]
[[Category: Single protein]]
[[Category: Turnip yellow mosaic virus]]
[[Category: Turnip yellow mosaic virus]]
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[[Category: virus/viral protein]]
[[Category: virus/viral protein]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 15:40:00 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 14:51:30 2008''

Revision as of 12:51, 20 March 2008

Image:1w39.gif


PDB ID 1w39

Drag the structure with the mouse to rotate
, resolution 3.75Å
Coordinates: save as pdb, mmCIF, xml



CRYSTAL STRUCTURE OF AN ARTIFICIAL TOP COMPONENT OF TURNIP YELLOW MOSAIC VIRUS


Overview

Empty capsids (artificial top component) of turnip yellow mosaic virus were co-crystallized with an encapsidation initiator RNA hairpin. No clear density was observed for the RNA, but there were clear differences in the conformation of a loop of the coat protein at the opening of the pentameric capsomer (formed by five A-subunits) protruding from the capsid, compared to the corresponding loop in the intact virus. Further differences were found at the N terminus of the A-subunit. These differences have implications for the mechanism of decapsidation of the virus, required for infection.

About this Structure

1W39 is a Single protein structure of sequence from Turnip yellow mosaic virus. Full crystallographic information is available from OCA.

Reference

Crystal structure of an empty capsid of turnip yellow mosaic virus., van Roon AM, Bink HH, Plaisier JR, Pleij CW, Abrahams JP, Pannu NS, J Mol Biol. 2004 Aug 27;341(5):1205-14. PMID:15321716

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