3sdt
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3sdt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Abies_grandis Abies grandis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SDT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SDT FirstGlance]. <br> | <table><tr><td colspan='2'>[[3sdt]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Abies_grandis Abies grandis]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3SDT OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3SDT FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AHD:4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE'>AHD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=AHD:4-AMINO-1-HYDROXYBUTANE-1,1-DIYLDIPHOSPHONATE'>AHD</scene>, <scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3sae|3sae]], [[3sdq|3sdq]], [[3sdr|3sdr]], [[3sdu|3sdu]], [[3sdv|3sdv]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3sae|3sae]], [[3sdq|3sdq]], [[3sdr|3sdr]], [[3sdu|3sdu]], [[3sdv|3sdv]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ag1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=46611 Abies grandis])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">ag1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=46611 Abies grandis])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-bisabolene_synthase Alpha-bisabolene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.38 4.2.3.38] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Alpha-bisabolene_synthase Alpha-bisabolene synthase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=4.2.3.38 4.2.3.38] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sdt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sdt RCSB], [http://www.ebi.ac.uk/pdbsum/3sdt PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3sdt FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3sdt OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3sdt RCSB], [http://www.ebi.ac.uk/pdbsum/3sdt PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/TPSD1_ABIGR TPSD1_ABIGR]] Involved in defensive oleoresin formation in conifers in response to insect attack or other injury. Involved in sesquiterpene (C15) olefins biosynthesis.<ref>PMID:9539701</ref> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.,McAndrew RP, Peralta-Yahya PP, DeGiovanni A, Pereira JH, Hadi MZ, Keasling JD, Adams PD Structure. 2011 Dec 7;19(12):1876-84. PMID:22153510<ref>PMID:22153510</ref> | Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production.,McAndrew RP, Peralta-Yahya PP, DeGiovanni A, Pereira JH, Hadi MZ, Keasling JD, Adams PD Structure. 2011 Dec 7;19(12):1876-84. PMID:22153510<ref>PMID:22153510</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
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[[Category: Abies grandis]] | [[Category: Abies grandis]] | ||
[[Category: Alpha-bisabolene synthase]] | [[Category: Alpha-bisabolene synthase]] | ||
| - | [[Category: Adams, P D | + | [[Category: Adams, P D]] |
| - | [[Category: DeGiovanni, A | + | [[Category: DeGiovanni, A]] |
| - | [[Category: Hadi, M Z | + | [[Category: Hadi, M Z]] |
| - | [[Category: Keasling, J D | + | [[Category: Keasling, J D]] |
| - | [[Category: McAndrew, R P | + | [[Category: McAndrew, R P]] |
| - | [[Category: Peralta-Yahya, P P | + | [[Category: Peralta-Yahya, P P]] |
| - | [[Category: Pereira, J H | + | [[Category: Pereira, J H]] |
[[Category: Lyase]] | [[Category: Lyase]] | ||
[[Category: Terpene synthase]] | [[Category: Terpene synthase]] | ||
Revision as of 16:23, 24 December 2014
Structure of a three-domain sesquiterpene synthase: a prospective target for advanced biofuels production
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