This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


1uf5

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "1uf5" [edit=sysop:move=sysop])
Line 1: Line 1:
-
[[Image:1uf5.png|left|200px]]
+
==Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-methionine==
-
 
+
<StructureSection load='1uf5' size='340' side='right' caption='[[1uf5]], [[Resolution|resolution]] 1.60&Aring;' scene=''>
-
{{STRUCTURE_1uf5| PDB=1uf5 | SCENE= }}
+
== Structural highlights ==
-
 
+
<table><tr><td colspan='2'>[[1uf5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_sp. Agrobacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UF5 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UF5 FirstGlance]. <br>
-
===Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-methionine===
+
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CDT:4-METHYLSULFANYL-2-UREIDO-BUTYRIC+ACID'>CDT</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene></td></tr>
-
 
+
<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1erz|1erz]], [[1uf4|1uf4]], [[1uf7|1uf7]], [[1uf8|1uf8]]</td></tr>
-
 
+
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/N-carbamoyl-D-amino-acid_hydrolase N-carbamoyl-D-amino-acid hydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.5.1.77 3.5.1.77] </span></td></tr>
-
==About this Structure==
+
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uf5 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uf5 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uf5 RCSB], [http://www.ebi.ac.uk/pdbsum/1uf5 PDBsum]</span></td></tr>
-
[[1uf5]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Agrobacterium_sp. Agrobacterium sp.]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UF5 OCA].
+
</table>
-
[[Category: Agrobacterium sp.]]
+
== Function ==
 +
[[http://www.uniprot.org/uniprot/DCAS_AGRSK DCAS_AGRSK]] The enzyme catalyzes the hydrolysis of N-carbamoyl-D-amino acids to the corresponding which are useful intermediates in the preparation of beta-lactam antibiotics. Industrial production of beta-lactam antibiotics is now being developed using this enzyme.
 +
== Evolutionary Conservation ==
 +
[[Image:Consurf_key_small.gif|200px|right]]
 +
Check<jmol>
 +
<jmolCheckbox>
 +
<scriptWhenChecked>select protein; define ~consurf_to_do selected; consurf_initial_scene = true; script "/wiki/ConSurf/uf/1uf5_consurf.spt"</scriptWhenChecked>
 +
<scriptWhenUnchecked>script /wiki/extensions/Proteopedia/spt/initialview01.spt</scriptWhenUnchecked>
 +
<text>to colour the structure by Evolutionary Conservation</text>
 +
</jmolCheckbox>
 +
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf].
 +
<div style="clear:both"></div>
 +
__TOC__
 +
</StructureSection>
 +
[[Category: Agrobacterium sp]]
[[Category: N-carbamoyl-D-amino-acid hydrolase]]
[[Category: N-carbamoyl-D-amino-acid hydrolase]]
-
[[Category: Aoki, M.]]
+
[[Category: Aoki, M]]
-
[[Category: Hashimoto, H.]]
+
[[Category: Hashimoto, H]]
-
[[Category: Ikenaka, Y.]]
+
[[Category: Ikenaka, Y]]
-
[[Category: Morikawa, H.]]
+
[[Category: Morikawa, H]]
-
[[Category: Nakai, T.]]
+
[[Category: Nakai, T]]
-
[[Category: Sato, M.]]
+
[[Category: Sato, M]]
-
[[Category: Shimizu, T.]]
+
[[Category: Shimizu, T]]
-
[[Category: Takahashi, S.]]
+
[[Category: Takahashi, S]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]

Revision as of 23:16, 24 December 2014

Crystal structure of C171A/V236A Mutant of N-carbamyl-D-amino acid amidohydrolase complexed with N-carbamyl-D-methionine

1uf5, resolution 1.60Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools