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1vp7
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1vp7]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis_tohama_i Bordetella pertussis tohama i]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VP7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VP7 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1vp7]] is a 6 chain structure with sequence from [http://en.wikipedia.org/wiki/Bordetella_pertussis_tohama_i Bordetella pertussis tohama i]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VP7 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VP7 FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> | + | </td></tr><tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MSE:SELENOMETHIONINE'>MSE</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NP_881400.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257313 Bordetella pertussis Tohama I])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">NP_881400.1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=257313 Bordetella pertussis Tohama I])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Exodeoxyribonuclease_VII Exodeoxyribonuclease VII], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.11.6 3.1.11.6] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Exodeoxyribonuclease_VII Exodeoxyribonuclease VII], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.1.11.6 3.1.11.6] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vp7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vp7 RCSB], [http://www.ebi.ac.uk/pdbsum/1vp7 PDBsum], [http://www.topsan.org/Proteins/JCSG/1vp7 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vp7 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vp7 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vp7 RCSB], [http://www.ebi.ac.uk/pdbsum/1vp7 PDBsum], [http://www.topsan.org/Proteins/JCSG/1vp7 TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/EX7S_BORPA EX7S_BORPA]] Bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides (By similarity). | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
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[[Category: Bordetella pertussis tohama i]] | [[Category: Bordetella pertussis tohama i]] | ||
[[Category: Exodeoxyribonuclease VII]] | [[Category: Exodeoxyribonuclease VII]] | ||
| - | [[Category: | + | [[Category: Structural genomic]] |
[[Category: Exodeoxyribonuclease vii small subunit e c.3 1.11 6]] | [[Category: Exodeoxyribonuclease vii small subunit e c.3 1.11 6]] | ||
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Jcsg]] | [[Category: Jcsg]] | ||
| - | [[Category: Joint center for structural genomic]] | ||
[[Category: Np_881400 1]] | [[Category: Np_881400 1]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
Revision as of 03:37, 25 December 2014
Crystal structure of Exodeoxyribonuclease VII small subunit (NP_881400.1) from Bordetella pertussis at 2.40 A resolution
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