2cpo

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2cpo.jpg|left|200px]]<br /><applet load="2cpo" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:2cpo.jpg|left|200px]]
-
caption="2cpo, resolution 2.1&Aring;" />
+
 
-
'''CHLOROPEROXIDASE'''<br />
+
{{Structure
 +
|PDB= 2cpo |SIZE=350|CAPTION= <scene name='initialview01'>2cpo</scene>, resolution 2.1&Aring;
 +
|SITE= <scene name='pdbsite=HE1:Heme+Proximal+Site'>HE1</scene>, <scene name='pdbsite=HEM:Heme+Distal+Site'>HEM</scene>, <scene name='pdbsite=MN:Mn+Binding+Site'>MN</scene>, <scene name='pdbsite=NG1:N-Glycosylation+Site'>NG1</scene>, <scene name='pdbsite=NG2:N-Glycosylation+Site'>NG2</scene>, <scene name='pdbsite=NG3:N-Glycosylation+Site'>NG3</scene>, <scene name='pdbsite=OG1:O-Glycosylation+Site'>OG1</scene>, <scene name='pdbsite=OG2:O-Glycosylation+Site'>OG2</scene>, <scene name='pdbsite=OG3:O-Glycosylation+Site'>OG3</scene>, <scene name='pdbsite=OG4:O-Glycosylation+Site'>OG4</scene>, <scene name='pdbsite=OG5:O-Glycosylation+Site'>OG5</scene>, <scene name='pdbsite=OG6:O-Glycosylation+Site'>OG6</scene>, <scene name='pdbsite=OG7:O-Glycosylation+Site'>OG7</scene> and <scene name='pdbsite=OG8:O-Glycosylation+Site'>OG8</scene>
 +
|LIGAND= <scene name='pdbligand=NAG:N-ACETYL-D-GLUCOSAMINE'>NAG</scene>, <scene name='pdbligand=MAN:ALPHA-D-MANNOSE'>MAN</scene>, <scene name='pdbligand=MN:MANGANESE+(II)+ION'>MN</scene> and <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Chloride_peroxidase Chloride peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.10 1.11.1.10]
 +
|GENE=
 +
}}
 +
 
 +
'''CHLOROPEROXIDASE'''
 +
 
==Overview==
==Overview==
Line 7: Line 16:
==About this Structure==
==About this Structure==
-
2CPO is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Leptoxyphium_fumago Leptoxyphium fumago] with <scene name='pdbligand=NAG:'>NAG</scene>, <scene name='pdbligand=MAN:'>MAN</scene>, <scene name='pdbligand=MN:'>MN</scene> and <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Chloride_peroxidase Chloride peroxidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.11.1.10 1.11.1.10] Known structural/functional Sites: <scene name='pdbsite=HE1:Heme+Proximal+Site'>HE1</scene>, <scene name='pdbsite=HEM:Heme+Distal+Site'>HEM</scene>, <scene name='pdbsite=MN:Mn+Binding+Site'>MN</scene>, <scene name='pdbsite=NG1:N-Glycosylation+Site'>NG1</scene>, <scene name='pdbsite=NG2:N-Glycosylation+Site'>NG2</scene>, <scene name='pdbsite=NG3:N-Glycosylation+Site'>NG3</scene>, <scene name='pdbsite=OG1:O-Glycosylation+Site'>OG1</scene>, <scene name='pdbsite=OG2:O-Glycosylation+Site'>OG2</scene>, <scene name='pdbsite=OG3:O-Glycosylation+Site'>OG3</scene>, <scene name='pdbsite=OG4:O-Glycosylation+Site'>OG4</scene>, <scene name='pdbsite=OG5:O-Glycosylation+Site'>OG5</scene>, <scene name='pdbsite=OG6:O-Glycosylation+Site'>OG6</scene>, <scene name='pdbsite=OG7:O-Glycosylation+Site'>OG7</scene> and <scene name='pdbsite=OG8:O-Glycosylation+Site'>OG8</scene>. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CPO OCA].
+
2CPO is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Leptoxyphium_fumago Leptoxyphium fumago]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2CPO OCA].
==Reference==
==Reference==
-
The crystal structure of chloroperoxidase: a heme peroxidase--cytochrome P450 functional hybrid., Sundaramoorthy M, Terner J, Poulos TL, Structure. 1995 Dec 15;3(12):1367-77. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=8747463 8747463]
+
The crystal structure of chloroperoxidase: a heme peroxidase--cytochrome P450 functional hybrid., Sundaramoorthy M, Terner J, Poulos TL, Structure. 1995 Dec 15;3(12):1367-77. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/8747463 8747463]
[[Category: Chloride peroxidase]]
[[Category: Chloride peroxidase]]
[[Category: Leptoxyphium fumago]]
[[Category: Leptoxyphium fumago]]
Line 24: Line 33:
[[Category: heme peroxidase]]
[[Category: heme peroxidase]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:51:10 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:18:28 2008''

Revision as of 14:18, 20 March 2008


PDB ID 2cpo

Drag the structure with the mouse to rotate
, resolution 2.1Å
Sites: , , , , , , , , , , , , and
Ligands: , , and
Activity: Chloride peroxidase, with EC number 1.11.1.10
Coordinates: save as pdb, mmCIF, xml



CHLOROPEROXIDASE


Overview

BACKGROUND: Chloroperoxidase (CPO) is a versatile heme-containing enzyme that exhibits peroxidase, catalase and cytochrome P450-like activities in addition to catalyzing halogenation reactions. The structure determination of CPO was undertaken to help elucidate those structural features that enable the enzyme to exhibit these multiple activities. RESULTS: Despite functional similarities with other heme enzymes, CPO folds into a novel tertiary structure dominated by eight helical segments. The catalytic base, required to cleave the peroxide O-O bond, is glutamic acid rather than histidine as in other peroxidases. CPO contains a hydrophobic patch above the heme that could be the binding site for substrates that undergo P450-like reactions. The crystal structure also shows extensive glycosylation with both N- and O-linked glycosyl chains. CONCLUSIONS: The proximal side of the heme in CPO resembles cytochrome P450 because a cysteine residue serves as an axial heme ligand, whereas the distal side of the heme is 'peroxidase-like' in that polar residues form the peroxide-binding site. Access to the heme pocket is restricted to the distal face such that small organic substrates can interact with the iron-linked oxygen atom which accounts for the P450-like reactions catalyzed by chloroperoxidase.

About this Structure

2CPO is a Single protein structure of sequence from Leptoxyphium fumago. Full crystallographic information is available from OCA.

Reference

The crystal structure of chloroperoxidase: a heme peroxidase--cytochrome P450 functional hybrid., Sundaramoorthy M, Terner J, Poulos TL, Structure. 1995 Dec 15;3(12):1367-77. PMID:8747463

Page seeded by OCA on Thu Mar 20 16:18:28 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools