This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


4ben

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
m (Protected "4ben" [edit=sysop:move=sysop])
Line 1: Line 1:
-
{{STRUCTURE_4ben| PDB=4ben | SCENE= }}
+
==R39-imipenem Acyl-enzyme crystal structure==
-
===R39-imipenem Acyl-enzyme crystal structure===
+
<StructureSection load='4ben' size='340' side='right' caption='[[4ben]], [[Resolution|resolution]] 2.15&Aring;' scene=''>
-
 
+
== Structural highlights ==
-
==Function==
+
<table><tr><td colspan='2'>[[4ben]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Actsp Actsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BEN OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4BEN FirstGlance]. <br>
 +
</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IM2:(5R)-5-[(1S,2R)-1-FORMYL-2-HYDROXYPROPYL]-3-[(2-{[(E)-IMINOMETHYL]AMINO}ETHYL)SULFANYL]-4,5-DIHYDRO-1H-PYRROLE-2-CARBOXYLIC+ACID'>IM2</scene>, <scene name='pdbligand=MES:2-(N-MORPHOLINO)-ETHANESULFONIC+ACID'>MES</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ben FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ben OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ben RCSB], [http://www.ebi.ac.uk/pdbsum/4ben PDBsum]</span></td></tr>
 +
</table>
 +
== Function ==
[[http://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP]] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.
[[http://www.uniprot.org/uniprot/DAC_ACTSP DAC_ACTSP]] Removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors.
-
==About this Structure==
+
==See Also==
-
[[4ben]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Actsp Actsp]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4BEN OCA].
+
*[[Penicillin-binding protein|Penicillin-binding protein]]
 +
__TOC__
 +
</StructureSection>
[[Category: Actsp]]
[[Category: Actsp]]
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
-
[[Category: Charlier, P.]]
+
[[Category: Charlier, P]]
-
[[Category: Elder, D Van.]]
+
[[Category: Elder, D Van]]
-
[[Category: Herman, R.]]
+
[[Category: Herman, R]]
-
[[Category: Kerff, F.]]
+
[[Category: Kerff, F]]
-
[[Category: Rocaboy, M.]]
+
[[Category: Rocaboy, M]]
-
[[Category: Sauvage, E.]]
+
[[Category: Sauvage, E]]
[[Category: Acyl-enzyme]]
[[Category: Acyl-enzyme]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Penicillin-binding]]
[[Category: Penicillin-binding]]

Revision as of 10:16, 25 December 2014

R39-imipenem Acyl-enzyme crystal structure

4ben, resolution 2.15Å

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools