3w9r
From Proteopedia
(Difference between revisions)
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| - | + | ==Crystal structure of the high-affinity abscisic acid receptor PYL9/RCAR9 bound to ABA== | |
| - | + | <StructureSection load='3w9r' size='340' side='right' caption='[[3w9r]], [[Resolution|resolution]] 1.90Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[3w9r]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Arath Arath]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3W9R OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3W9R FirstGlance]. <br> | |
| - | ==Function== | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=A8S:(2Z,4E)-5-[(1S)-1-HYDROXY-2,6,6-TRIMETHYL-4-OXOCYCLOHEX-2-EN-1-YL]-3-METHYLPENTA-2,4-DIENOIC+ACID'>A8S</scene>, <scene name='pdbligand=P6G:HEXAETHYLENE+GLYCOL'>P6G</scene></td></tr> |
| + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">At1g01360, F6F3.16, PYL9, RCAR1 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=3702 ARATH])</td></tr> | ||
| + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3w9r FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3w9r OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3w9r RCSB], [http://www.ebi.ac.uk/pdbsum/3w9r PDBsum]</span></td></tr> | ||
| + | </table> | ||
| + | == Function == | ||
[[http://www.uniprot.org/uniprot/PYL9_ARATH PYL9_ARATH]] Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA. Confers enhanced sensitivity to ABA.<ref>PMID:19407143</ref> | [[http://www.uniprot.org/uniprot/PYL9_ARATH PYL9_ARATH]] Receptor for abscisic acid (ABA) required for ABA-mediated responses such as stomatal closure and germination inhibition. Inhibits the activity of group-A protein phosphatases type 2C (PP2Cs) when activated by ABA. Confers enhanced sensitivity to ABA.<ref>PMID:19407143</ref> | ||
| + | <div style="background-color:#fffaf0;"> | ||
| + | == Publication Abstract from PubMed == | ||
| + | Arabidopsis receptors of abscisic acid (ABA), the key plant hormone for adaptation to water stress, comprise 14 PYR/PYLs/RCARs proteins classified into three subfamilies I, II, and III, which suggests functional differentiation. Although their monomer-dimer equilibria may be correlated with differences in their ABA-binding affinities, how the dimerization decreases the affinity is unclear. Comparative structural and binding studies between PYL9, which is a representative of high-affinity subfamily I, and low-affinity members of subfamily III reveals that the nonpolar triplet (Ile110, Val162, and Leu165) and Pro64 contribute to enhance ABA-binding affinity by inducing a shift of the ABA carboxyl group to form additional direct hydrogen bonds with conserved Asn169. Our mutation studies of PYL1 successfully produced a monomeric mutant PYL1 exhibiting low ABA affinity and also a dimeric mutant PYL1 exhibiting high ABA-binding affinity, suggesting that dimer formation of ABA receptors is not essential for their low ABA-binding affinity. Our study contributes toward establishing the structural basis for the higher ABA-binding affinity of the subfamily receptors and provides a clue for understanding the broad spectrum of hormone actions in plants manifested by the different hormone-binding affinity of multiple receptors. | ||
| - | + | Mechanism of high-affinity abscisic acid binding to PYL9/RCAR1.,Nakagawa M, Kagiyama M, Shibata N, Hirano Y, Hakoshima T Genes Cells. 2014 Mar 19. doi: 10.1111/gtc.12140. PMID:24645846<ref>PMID:24645846</ref> | |
| - | + | ||
| - | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
| - | + | </div> | |
| - | [[Category: Hakoshima, T | + | == References == |
| - | [[Category: Hirano, Y | + | <references/> |
| - | [[Category: Kagiyama, M | + | __TOC__ |
| - | [[Category: Nakagawa, M | + | </StructureSection> |
| - | [[Category: Shibata, N | + | [[Category: Arath]] |
| + | [[Category: Hakoshima, T]] | ||
| + | [[Category: Hirano, Y]] | ||
| + | [[Category: Kagiyama, M]] | ||
| + | [[Category: Nakagawa, M]] | ||
| + | [[Category: Shibata, N]] | ||
[[Category: Abscisic acid receptor]] | [[Category: Abscisic acid receptor]] | ||
[[Category: Drought tolerance]] | [[Category: Drought tolerance]] | ||
Revision as of 10:43, 25 December 2014
Crystal structure of the high-affinity abscisic acid receptor PYL9/RCAR9 bound to ABA
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