3r6m
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3r6m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R6M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R6M FirstGlance]. <br> | <table><tr><td colspan='2'>[[3r6m]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Vibrio_parahaemolyticus Vibrio parahaemolyticus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3R6M OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3R6M FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP0866, YeaZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=670 Vibrio parahaemolyticus])</td></tr> | + | </td></tr><tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">VP0866, YeaZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=670 Vibrio parahaemolyticus])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r6m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r6m RCSB], [http://www.ebi.ac.uk/pdbsum/3r6m PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3r6m FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3r6m OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3r6m RCSB], [http://www.ebi.ac.uk/pdbsum/3r6m PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
| + | == Function == | ||
| + | [[http://www.uniprot.org/uniprot/Q87RD1_VIBPA Q87RD1_VIBPA]] Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaD and TsaE; this reaction does not require ATP in vitro. TsaB seems to play an indirect role in the t(6)A biosynthesis pathway, possibly in regulating the core enzymatic function of TsaD (By similarity). | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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Structural Analysis of the Essential Resuscitation Promoting Factor YeaZ Suggests a Mechanism of Nucleotide Regulation through Dimer Reorganization.,Aydin I, Saijo-Hamano Y, Namba K, Thomas C, Roujeinikova A PLoS One. 2011;6(8):e23245. Epub 2011 Aug 17. PMID:21858042<ref>PMID:21858042</ref> | Structural Analysis of the Essential Resuscitation Promoting Factor YeaZ Suggests a Mechanism of Nucleotide Regulation through Dimer Reorganization.,Aydin I, Saijo-Hamano Y, Namba K, Thomas C, Roujeinikova A PLoS One. 2011;6(8):e23245. Epub 2011 Aug 17. PMID:21858042<ref>PMID:21858042</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Vibrio parahaemolyticus]] | [[Category: Vibrio parahaemolyticus]] | ||
| - | [[Category: Aydin, I | + | [[Category: Aydin, I]] |
| - | [[Category: Roujeinikova, A | + | [[Category: Roujeinikova, A]] |
[[Category: Actin/hsp70 nucleotide-binding fold]] | [[Category: Actin/hsp70 nucleotide-binding fold]] | ||
[[Category: Bacterial resuscitation]] | [[Category: Bacterial resuscitation]] | ||
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[[Category: Resuscitation promoting factor]] | [[Category: Resuscitation promoting factor]] | ||
[[Category: Viable but non-culturable state]] | [[Category: Viable but non-culturable state]] | ||
| - | [[Category: Vibrio parahaemolyticus]] | ||
[[Category: Ygjd]] | [[Category: Ygjd]] | ||
[[Category: Yjee]] | [[Category: Yjee]] | ||
Revision as of 12:20, 25 December 2014
Crystal structure of Vibrio parahaemolyticus YeaZ
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