2ghw

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[2ghw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Sars_coronavirus Sars coronavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GHW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GHW FirstGlance]. <br>
<table><tr><td colspan='2'>[[2ghw]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens] and [http://en.wikipedia.org/wiki/Sars_coronavirus Sars coronavirus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2GHW OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2GHW FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene><br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene></td></tr>
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<tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ghv|2ghv]], [[2ajf|2ajf]], [[1dzb|1dzb]]</td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[2ghv|2ghv]], [[2ajf|2ajf]], [[1dzb|1dzb]]</td></tr>
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">S ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=227859 SARS coronavirus])</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">S ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=227859 SARS coronavirus])</td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ghw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ghw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ghw RCSB], [http://www.ebi.ac.uk/pdbsum/2ghw PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ghw FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ghw OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ghw RCSB], [http://www.ebi.ac.uk/pdbsum/2ghw PDBsum]</span></td></tr>
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<table>
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</table>
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== Function ==
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[[http://www.uniprot.org/uniprot/SPIKE_CVHSA SPIKE_CVHSA]] S1 attaches the virion to the cell membrane by interacting with human ACE2 and CLEC4M/DC-SIGNR, initiating the infection. Binding to the receptor and internalization of the virus into the endosomes of the host cell probably induces conformational changes in the S glycoprotein. Proteolysis by cathepsin CTSL may unmask the fusion peptide of S2 and activate membranes fusion within endosomes. S2 is a class I viral fusion protein. Under the current model, the protein has at least three conformational states: pre-fusion native state, pre-hairpin intermediate state, and post-fusion hairpin state. During viral and target cell membrane fusion, the coiled coil regions (heptad repeats) assume a trimer-of-hairpins structure, positioning the fusion peptide in close proximity to the C-terminal region of the ectodomain. The formation of this structure appears to drive apposition and subsequent fusion of viral and target cell membranes.
== Evolutionary Conservation ==
== Evolutionary Conservation ==
[[Image:Consurf_key_small.gif|200px|right]]
[[Image:Consurf_key_small.gif|200px|right]]
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[[Category: Homo sapiens]]
[[Category: Homo sapiens]]
[[Category: Sars coronavirus]]
[[Category: Sars coronavirus]]
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[[Category: Farzan, M.]]
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[[Category: Farzan, M]]
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[[Category: Hwang, W C.]]
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[[Category: Hwang, W C]]
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[[Category: Jaroszewski, L.]]
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[[Category: Jaroszewski, L]]
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[[Category: Liddington, R C.]]
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[[Category: Liddington, R C]]
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[[Category: Lin, Y.]]
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[[Category: Lin, Y]]
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[[Category: Marasco, W A.]]
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[[Category: Marasco, W A]]
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[[Category: Santelli, E.]]
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[[Category: Santelli, E]]
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[[Category: Stec, B.]]
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[[Category: Stec, B]]
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[[Category: Sui, J.]]
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[[Category: Sui, J]]
[[Category: Neutralizing antibody]]
[[Category: Neutralizing antibody]]
[[Category: S protein]]
[[Category: S protein]]
[[Category: Sar]]
[[Category: Sar]]
[[Category: Virus-viral protein-antibiotic complex]]
[[Category: Virus-viral protein-antibiotic complex]]

Revision as of 12:51, 25 December 2014

Crystal structure of SARS spike protein receptor binding domain in complex with a neutralizing antibody, 80R

2ghw, resolution 2.30Å

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