This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.


Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.


2dkg

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
[[Image:2dkg.gif|left|200px]]<br /><applet load="2dkg" size="350" color="white" frame="true" align="right" spinBox="true"
+
[[Image:2dkg.gif|left|200px]]
-
caption="2dkg, resolution 2.00&Aring;" />
+
 
-
'''Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in Complex with Biotinyl-5'-AMP, Pyrophosphate and Mg(2+)'''<br />
+
{{Structure
 +
|PDB= 2dkg |SIZE=350|CAPTION= <scene name='initialview01'>2dkg</scene>, resolution 2.00&Aring;
 +
|SITE=
 +
|LIGAND= <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene>, <scene name='pdbligand=BT5:BIOTINYL-5-AMP'>BT5</scene> and <scene name='pdbligand=POP:PYROPHOSPHATE 2-'>POP</scene>
 +
|ACTIVITY= [http://en.wikipedia.org/wiki/Biotin--[acetyl-CoA-carboxylase]_ligase Biotin--[acetyl-CoA-carboxylase] ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.4.15 6.3.4.15]
 +
|GENE= birA ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=53953 Pyrococcus horikoshii])
 +
}}
 +
 
 +
'''Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in Complex with Biotinyl-5'-AMP, Pyrophosphate and Mg(2+)'''
 +
 
==About this Structure==
==About this Structure==
-
2DKG is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii] with <scene name='pdbligand=MG:'>MG</scene>, <scene name='pdbligand=BT5:'>BT5</scene> and <scene name='pdbligand=POP:'>POP</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Active as [http://en.wikipedia.org/wiki/Biotin--[acetyl-CoA-carboxylase]_ligase Biotin--[acetyl-CoA-carboxylase] ligase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=6.3.4.15 6.3.4.15] Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DKG OCA].
+
2DKG is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Pyrococcus_horikoshii Pyrococcus horikoshii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2DKG OCA].
[[Category: Biotin--[acetyl-CoA-carboxylase] ligase]]
[[Category: Biotin--[acetyl-CoA-carboxylase] ligase]]
[[Category: Pyrococcus horikoshii]]
[[Category: Pyrococcus horikoshii]]
Line 16: Line 25:
[[Category: biotin biosynthesis]]
[[Category: biotin biosynthesis]]
[[Category: dimer]]
[[Category: dimer]]
-
[[Category: national project on protein structural and functional analyses]]
+
[[Category: national project on protein structural and functional analyse]]
[[Category: nppsfa]]
[[Category: nppsfa]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: riken structural genomics/proteomics initiative]]
[[Category: rsgi]]
[[Category: rsgi]]
-
[[Category: structural genomics]]
+
[[Category: structural genomic]]
[[Category: x-ray diffraction]]
[[Category: x-ray diffraction]]
-
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 16:59:48 2008''
+
''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 16:28:13 2008''

Revision as of 14:28, 20 March 2008


PDB ID 2dkg

Drag the structure with the mouse to rotate
, resolution 2.00Å
Ligands: , and
Gene: birA (Pyrococcus horikoshii)
Activity: [acetyl-CoA-carboxylase_ligase Biotin--[acetyl-CoA-carboxylase] ligase], with EC number 6.3.4.15
Coordinates: save as pdb, mmCIF, xml



Crystal Structure Of Biotin Protein Ligase From Pyrococcus Horikoshii OT3 in Complex with Biotinyl-5'-AMP, Pyrophosphate and Mg(2+)


About this Structure

2DKG is a Single protein structure of sequence from Pyrococcus horikoshii. Full crystallographic information is available from OCA. [[Category: Biotin--[acetyl-CoA-carboxylase] ligase]]

Page seeded by OCA on Thu Mar 20 16:28:13 2008

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools