3zvq

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{{STRUCTURE_3zvq| PDB=3zvq | SCENE= }}
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==Crystal Structure of proteolyzed lysozyme==
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===Crystal Structure of proteolyzed lysozyme===
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<StructureSection load='3zvq' size='340' side='right' caption='[[3zvq]], [[Resolution|resolution]] 2.00&Aring;' scene=''>
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{{ABSTRACT_PUBMED_19508200}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3zvq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZVQ OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZVQ FirstGlance]. <br>
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==Function==
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</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1w6z|1w6z]], [[1kxx|1kxx]], [[2ybi|2ybi]], [[2ybn|2ybn]], [[3lyo|3lyo]], [[4lyo|4lyo]], [[1t6v|1t6v]], [[1kip|1kip]], [[1vds|1vds]], [[1ic7|1ic7]], [[1lzt|1lzt]], [[2xbr|2xbr]], [[1kir|1kir]], [[1lys|1lys]], [[1e8l|1e8l]], [[1bwj|1bwj]], [[132l|132l]], [[1yil|1yil]], [[1heo|1heo]], [[1sfg|1sfg]], [[1kxw|1kxw]], [[2c8o|2c8o]], [[2x0a|2x0a]], [[1sf4|1sf4]], [[1g7l|1g7l]], [[1yl1|1yl1]], [[1ior|1ior]], [[1h87|1h87]], [[3lyt|3lyt]], [[1ljg|1ljg]], [[1iot|1iot]], [[1dpx|1dpx]], [[1v7s|1v7s]], [[1ja6|1ja6]], [[1jis|1jis]], [[1ir8|1ir8]], [[2w1m|2w1m]], [[1uic|1uic]], [[1ykz|1ykz]], [[1xgq|1xgq]], [[1uie|1uie]], [[2war|2war]], [[1lji|1lji]], [[1dpw|1dpw]], [[8lyz|8lyz]], [[1lj3|1lj3]], [[2iff|2iff]], [[2lyo|2lyo]], [[1bwi|1bwi]], [[1g7h|1g7h]], [[1lks|1lks]], [[1jj0|1jj0]], [[1rfp|1rfp]], [[5lyt|5lyt]], [[1jiy|1jiy]], [[1sfb|1sfb]], [[1ir7|1ir7]], [[1iee|1iee]], [[1xei|1xei]], [[1hel|1hel]], [[1xek|1xek]], [[1at6|1at6]], [[1ljf|1ljf]], [[2ydg|2ydg]], [[1mlc|1mlc]], [[1f10|1f10]], [[2b5z|2b5z]], [[193l|193l]], [[1lsz|1lsz]], [[2ybm|2ybm]], [[1ljk|1ljk]], [[6lyt|6lyt]], [[1sq2|1sq2]], [[1vdq|1vdq]], [[1zmy|1zmy]], [[2ybh|2ybh]], [[2d91|2d91]], [[2xth|2xth]], [[1lje|1lje]], [[1lze|1lze]], [[1b2k|1b2k]], [[2ybj|2ybj]], [[1aki|1aki]], [[1uia|1uia]], [[1hen|1hen]], [[1yik|1yik]], [[1xfp|1xfp]], [[2d6b|2d6b]], [[1ndg|1ndg]], [[1lpi|1lpi]], [[1lsd|1lsd]], [[1flw|1flw]], [[2blx|2blx]], [[6lyz|6lyz]], [[1lsg|1lsg]], [[1nbz|1nbz]], [[4lyt|4lyt]], [[3hfm|3hfm]], [[1ved|1ved]], [[1jit|1jit]], [[1lzn|1lzn]], [[1wtn|1wtn]], [[1lyz|1lyz]], [[1uuz|1uuz]], [[1ja2|1ja2]], [[2d4i|2d4i]], [[2xbs|2xbs]], [[2fbb|2fbb]], [[1fdl|1fdl]], [[2lym|2lym]], [[1lz9|1lz9]], [[1lzh|1lzh]], [[1lse|1lse]], [[1gxx|1gxx]], [[1lsm|1lsm]], [[7lyz|7lyz]], [[3lym|3lym]], [[1jj3|1jj3]], [[1yky|1yky]], [[1heq|1heq]], [[1kiq|1kiq]], [[1t3p|1t3p]], [[1uih|1uih]], [[2lzh|2lzh]], [[1kxy|1kxy]], [[2w1l|2w1l]], [[1b0d|1b0d]], [[2bly|2bly]], [[1g7j|1g7j]], [[1her|1her]], [[1bhz|1bhz]], [[1wtm|1wtm]], [[1hep|1hep]], [[1ioq|1ioq]], [[1nby|1nby]], [[1jtt|1jtt]], [[1qio|1qio]], [[1lza|1lza]], [[1ps5|1ps5]], [[1xgp|1xgp]], [[1gwd|1gwd]], [[1v7t|1v7t]], [[1jpo|1jpo]], [[1h6m|1h6m]], [[1j1p|1j1p]], [[1dqj|1dqj]], [[2a7d|2a7d]], [[1ljj|1ljj]], [[2c8p|2c8p]], [[1z55|1z55]], [[1lsb|1lsb]], [[1f0w|1f0w]], [[2w1x|2w1x]], [[1lzg|1lzg]], [[1flq|1flq]], [[1lzc|1lzc]], [[1jj1|1jj1]], [[1rcm|1rcm]], [[2ybl|2ybl]], [[1yqv|1yqv]], [[1uid|1uid]], [[1bgi|1bgi]], [[1hsx|1hsx]], [[1lcn|1lcn]], [[1lzd|1lzd]], [[1hew|1hew]], [[2cds|2cds]], [[2vb1|2vb1]], [[2aub|2aub]], [[1uib|1uib]], [[1hf4|1hf4]], [[1j1x|1j1x]], [[1ir9|1ir9]], [[1ios|1ios]], [[2cgi|2cgi]], [[1rjc|1rjc]], [[1uc0|1uc0]], [[1azf|1azf]], [[1ic4|1ic4]], [[1ljh|1ljh]], [[4lyz|4lyz]], [[1gpq|1gpq]], [[2a6u|2a6u]], [[2d4k|2d4k]], [[1xej|1xej]], [[1ja7|1ja7]], [[1mel|1mel]], [[1ri8|1ri8]], [[1uig|1uig]], [[1bvx|1bvx]], [[1c10|1c10]], [[1qtk|1qtk]], [[1lkr|1lkr]], [[2xjw|2xjw]], [[1lyo|1lyo]], [[1n4f|1n4f]], [[1hsw|1hsw]], [[1g7m|1g7m]], [[1jto|1jto]], [[2w1y|2w1y]], [[1sf7|1sf7]], [[1lsf|1lsf]], [[1fn5|1fn5]], [[2d4j|2d4j]], [[5lyz|5lyz]], [[3lzt|3lzt]], [[1c08|1c08]], [[1ndm|1ndm]], [[1sf6|1sf6]], [[3lyz|3lyz]], [[1bvk|1bvk]], [[1uif|1uif]], [[2lyz|2lyz]], [[1vau|1vau]], [[1lma|1lma]], [[1fly|1fly]], [[1yl0|1yl0]], [[1hc0|1hc0]], [[1j1o|1j1o]], [[2lzt|2lzt]], [[4lzt|4lzt]], [[1a2y|1a2y]], [[1uco|1uco]], [[1lsy|1lsy]], [[1p2c|1p2c]], [[1lsa|1lsa]], [[5lym|5lym]], [[1ic5|1ic5]], [[1gxv|1gxv]], [[1ua6|1ua6]], [[1at5|1at5]], [[1lj4|1lj4]], [[1vat|1vat]], [[1vfb|1vfb]], [[1f3j|1f3j]], [[1hem|1hem]], [[1ja4|1ja4]], [[4lym|4lym]], [[2a7f|2a7f]], [[1flu|1flu]], [[194l|194l]], [[1lz8|1lz8]], [[1ykx|1ykx]], [[2hfm|2hfm]], [[1bwh|1bwh]], [[1vdt|1vdt]], [[1io5|1io5]], [[1lsn|1lsn]], [[2bpu|2bpu]], [[1lzb|1lzb]], [[1g7i|1g7i]], [[1lsc|1lsc]], [[1vdp|1vdp]]</td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Lysozyme Lysozyme], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.17 3.2.1.17] </span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zvq FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zvq OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zvq RCSB], [http://www.ebi.ac.uk/pdbsum/3zvq PDBsum]</span></td></tr>
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</table>
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== Function ==
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
[[http://www.uniprot.org/uniprot/LYSC_CHICK LYSC_CHICK]] Lysozymes have primarily a bacteriolytic function; those in tissues and body fluids are associated with the monocyte-macrophage system and enhance the activity of immunoagents. Has bacteriolytic activity against M.luteus.<ref>PMID:22044478</ref>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Proteases have been used not only for proteolysis but also in organic solvent-assisted religation processes. Here, we demonstrated the effect of salts on peptide bond resynthesis in Glutathione-S-transferase (GST) and have found it to be in the purview of the Hofmeister phenomena. Our results show that the efficiency and ease of religation increases with an increase in the surface charge densities of the cations used in the study. Thus, the yield of religated GST follows the order: Mg2(+)&gt;Li(+)&gt;Na(+)&gt;K(+). Characteristics of the salt-religated GST were studied using size exclusion chromatography, CD spectroscopy, mass spectrometry and CDNB activity assay. Results show that the properties of salt-religated GST are in close agreement with those of the native GST. Additionally, we also assessed the specific activity of the protease, Subtilisin Carlsberg, used in this study. Contrary, to aqueous-organic systems, wherein there is a remarkable decrease in the proteolytic activity, the activity in the presence of salts is only minimally changed. Our studies suggest that salt-assisted peptide bond formation is favoured primarily due to changes in the ionic environment of the nicked termini of GST, and that there is no role played by the protease.
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==About this Structure==
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Salt-assisted religation of proteolyzed Glutathione-S-transferase follows Hofmeister series.,Kishan KV, Sharma A Protein Pept Lett. 2010 Jan;17(1):54-63. PMID:19508200<ref>PMID:19508200</ref>
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[[3zvq]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Chick Chick]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZVQ OCA].
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
==See Also==
==See Also==
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*[[Hen Egg-White (HEW) Lysozyme|Hen Egg-White (HEW) Lysozyme]]
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*[[Lysozyme 3D structures|Lysozyme 3D structures]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:019508200</ref><references group="xtra"/><references/>
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__TOC__
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</StructureSection>
[[Category: Chick]]
[[Category: Chick]]
[[Category: Lysozyme]]
[[Category: Lysozyme]]
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[[Category: Kishan, K V.]]
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[[Category: Kishan, K V]]
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[[Category: Sharma, A.]]
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[[Category: Sharma, A]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Pmsf]]
[[Category: Pmsf]]
[[Category: Proteolysis]]
[[Category: Proteolysis]]
[[Category: Subtilisin]]
[[Category: Subtilisin]]

Revision as of 18:56, 25 December 2014

Crystal Structure of proteolyzed lysozyme

3zvq, resolution 2.00Å

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