2x5y
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2x5y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X5Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X5Y FirstGlance]. <br> | <table><tr><td colspan='2'>[[2x5y]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2X5Y OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2X5Y FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x5y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2x5y RCSB], [http://www.ebi.ac.uk/pdbsum/2x5y PDBsum]</span></td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2x5y FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2x5y OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2x5y RCSB], [http://www.ebi.ac.uk/pdbsum/2x5y PDBsum]</span></td></tr> |
- | <table> | + | </table> |
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/ZCCHV_HUMAN ZCCHV_HUMAN]] Antiviral protein which inhibits the replication of viruses by recruiting the cellular RNA degradation machineries to degrade the viral mRNAs. Binds to a ZAP-responsive element (ZRE) present in the target viral mRNA, recruits cellular poly(A)-specific ribonuclease PARN to remove the poly(A) tail, and the 3'-5' exoribonuclease complex exosome to degrade the RNA body from the 3'-end. It also recruits the decapping complex DCP1-DCP2 through RNA helicase p72 (DDX17) to remove the cap structure of the viral mRNA to initiate its degradation from the 5'-end. Its target viruses belong to families which include retroviridae: human immunodeficiency virus type 1 (HIV-1), moloney and murine leukemia virus (MoMLV) and xenotropic MuLV-related virus (XMRV), filoviridae: ebola virus (EBOV) and marburg virus (MARV), togaviridae: sindbis virus (SINV) and Ross river virus (RRV). Specifically targets the multiply spliced but not unspliced or singly spliced HIV-1 mRNAs for degradation. Isoform 1 is a more potent viral inhibitor than isoform 2. Isoform 2 acts as a positive regulator of DDX58/RIG-I signaling resulting in activation of the downstream effector IRF3 leading to the expression of type I IFNs and IFN stimulated genes (ISGs).<ref>PMID:18225958</ref> <ref>PMID:21102435</ref> <ref>PMID:21876179</ref> <ref>PMID:22720057</ref> | ||
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
Line 15: | Line 17: | ||
</jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | </jmol>, as determined by [http://consurfdb.tau.ac.il/ ConSurfDB]. You may read the [[Conservation%2C_Evolutionary|explanation]] of the method and the full data available from [http://bental.tau.ac.il/new_ConSurfDB/chain_selection.php?pdb_ID=2ata ConSurf]. | ||
<div style="clear:both"></div> | <div style="clear:both"></div> | ||
+ | == References == | ||
+ | <references/> | ||
__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
- | [[Category: Arrowsmith, C H | + | [[Category: Arrowsmith, C H]] |
- | [[Category: Berg, S Van Den | + | [[Category: Berg, S Van Den]] |
- | [[Category: Berglund, H | + | [[Category: Berglund, H]] |
- | [[Category: Bountra, C | + | [[Category: Bountra, C]] |
- | [[Category: Collins, R | + | [[Category: Collins, R]] |
- | [[Category: Edwards, A M | + | [[Category: Edwards, A M]] |
- | [[Category: Flodin, S | + | [[Category: Flodin, S]] |
- | [[Category: Flores, A | + | [[Category: Flores, A]] |
- | [[Category: Graslund, S | + | [[Category: Graslund, S]] |
- | [[Category: Hammarstrom, M | + | [[Category: Hammarstrom, M]] |
- | [[Category: Johansson, I | + | [[Category: Johansson, I]] |
- | [[Category: Kallas, A | + | [[Category: Kallas, A]] |
- | [[Category: Karlberg, T | + | [[Category: Karlberg, T]] |
- | [[Category: Kotenyova, T | + | [[Category: Kotenyova, T]] |
- | [[Category: Kraulis, P | + | [[Category: Kraulis, P]] |
- | [[Category: Moche, M | + | [[Category: Moche, M]] |
- | [[Category: Nordlund, P | + | [[Category: Nordlund, P]] |
- | [[Category: Nyman, T | + | [[Category: Nyman, T]] |
- | [[Category: Persson, C | + | [[Category: Persson, C]] |
- | [[Category: Schuler, H | + | [[Category: Schuler, H]] |
- | [[Category: Schutz, P | + | [[Category: Schutz, P]] |
- | [[Category: Siponen, M I | + | [[Category: Siponen, M I]] |
- | [[Category: Svensson, L | + | [[Category: Svensson, L]] |
- | [[Category: Thorsell, A G | + | [[Category: Thorsell, A G]] |
- | [[Category: Tresaugues, L | + | [[Category: Tresaugues, L]] |
- | [[Category: Weigelt, J | + | [[Category: Weigelt, J]] |
- | [[Category: Welin, M | + | [[Category: Welin, M]] |
- | [[Category: Wisniewska, M | + | [[Category: Wisniewska, M]] |
[[Category: Antiviral defense]] | [[Category: Antiviral defense]] | ||
[[Category: Immune system]] | [[Category: Immune system]] | ||
[[Category: Transferase]] | [[Category: Transferase]] |
Revision as of 20:42, 25 December 2014
HUMAN ZC3HAV1 (ARTD13), C-TERMINAL DOMAIN
|
Categories: Homo sapiens | Arrowsmith, C H | Berg, S Van Den | Berglund, H | Bountra, C | Collins, R | Edwards, A M | Flodin, S | Flores, A | Graslund, S | Hammarstrom, M | Johansson, I | Kallas, A | Karlberg, T | Kotenyova, T | Kraulis, P | Moche, M | Nordlund, P | Nyman, T | Persson, C | Schuler, H | Schutz, P | Siponen, M I | Svensson, L | Thorsell, A G | Tresaugues, L | Weigelt, J | Welin, M | Wisniewska, M | Antiviral defense | Immune system | Transferase