1uf2
From Proteopedia
(Difference between revisions)
Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1uf2]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Rice_dwarf_virus Rice dwarf virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UF2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UF2 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1uf2]] is a 16 chain structure with sequence from [http://en.wikipedia.org/wiki/Rice_dwarf_virus Rice dwarf virus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1UF2 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1UF2 FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uf2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uf2 RCSB], [http://www.ebi.ac.uk/pdbsum/1uf2 PDBsum]</span></td></tr> | + | </td></tr><tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1uf2 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1uf2 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1uf2 RCSB], [http://www.ebi.ac.uk/pdbsum/1uf2 PDBsum]</span></td></tr> |
- | <table> | + | </table> |
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/VP3_RDVA VP3_RDVA]] Capsid protein which self-assembles to form the inner icosahedral capsid with a T=2 symmetry, and consisting of 60 P3 dimers. [[http://www.uniprot.org/uniprot/VP7_RDVO VP7_RDVO]] Probable component of the transcriptional machinery present in the inner capsid. Displays dsRNA binding activity and may play an important role in the sorting of viral RNA and virion assembly. Together with the RNA-directed RNA polymerase P1 and capping enzyme P5, forms an transcriptional complex positioned near the channels situated at each of the five-fold vertices of the core. [[http://www.uniprot.org/uniprot/VP8_RDVO VP8_RDVO]] Capsid protein which self-assembles to form the outer icosahedral capsid with a T=13 symmetry, about 70 nm in diameter and consisting of 780 molecules capsid proteins. | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
Line 21: | Line 23: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Rice dwarf virus]] | [[Category: Rice dwarf virus]] | ||
- | [[Category: Cheng, R H | + | [[Category: Cheng, R H]] |
- | [[Category: Fujimoto, Z | + | [[Category: Fujimoto, Z]] |
- | [[Category: Higashi, T | + | [[Category: Higashi, T]] |
- | [[Category: Miyazaki, N | + | [[Category: Miyazaki, N]] |
- | [[Category: Mizuno, H | + | [[Category: Mizuno, H]] |
- | [[Category: Naitow, H | + | [[Category: Naitow, H]] |
- | [[Category: Nakagawa, A | + | [[Category: Nakagawa, A]] |
- | [[Category: Ogawa, A | + | [[Category: Ogawa, A]] |
- | [[Category: Omura, T | + | [[Category: Omura, T]] |
- | [[Category: Taka, J | + | [[Category: Taka, J]] |
- | [[Category: Tsukihara, T | + | [[Category: Tsukihara, T]] |
- | [[Category: Watanabe, Y | + | [[Category: Watanabe, Y]] |
[[Category: Icosahedral virus]] | [[Category: Icosahedral virus]] | ||
[[Category: Virus]] | [[Category: Virus]] | ||
[[Category: Virus component]] | [[Category: Virus component]] |
Revision as of 21:53, 25 December 2014
The Atomic Structure of Rice dwarf Virus (RDV)
|
Categories: Rice dwarf virus | Cheng, R H | Fujimoto, Z | Higashi, T | Miyazaki, N | Mizuno, H | Naitow, H | Nakagawa, A | Ogawa, A | Omura, T | Taka, J | Tsukihara, T | Watanabe, Y | Icosahedral virus | Virus | Virus component