3nbe

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{{STRUCTURE_3nbe| PDB=3nbe | SCENE= }}
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==Clitocybe nebularis ricin B-like lectin (CNL) in complex with N,N'-diacetyllactosediamine==
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===Clitocybe nebularis ricin B-like lectin (CNL) in complex with N,N'-diacetyllactosediamine===
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<StructureSection load='3nbe' size='340' side='right' caption='[[3nbe]], [[Resolution|resolution]] 1.86&Aring;' scene=''>
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{{ABSTRACT_PUBMED_22298779}}
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== Structural highlights ==
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<table><tr><td colspan='2'>[[3nbe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cline Cline]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NBE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3NBE FirstGlance]. <br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DLD:2-AZIDOETHYL+2-(ACETYLAMINO)-4-O-[2-(ACETYLAMINO)-2-DEOXY-BETA-D-GALACTOPYRANOSYL]-2-DEOXY-BETA-D-GLUCOPYRANOSIDE'>DLD</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene></td></tr>
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<tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3nbc|3nbc]], [[3nbd|3nbd]]</td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3nbe FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3nbe OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3nbe RCSB], [http://www.ebi.ac.uk/pdbsum/3nbe PDBsum]</span></td></tr>
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</table>
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<div style="background-color:#fffaf0;">
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== Publication Abstract from PubMed ==
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Lectins are carbohydrate-binding proteins that exert their biological activity by binding to specific cell glycoreceptors. We have expressed CNL, a ricin B-like lectin from the basidiomycete Clitocybe nebularis, in Escherichia coli. The recombinant lectin, rCNL, agglutinates human blood group A erythrocytes and is specific for the unique glycan N,N'-diacetyllactosediamine (GalNAcbeta1-4GlcNAc, LacdiNAc, LDN) as demonstrated by glycan microarray analysis. We here describe the crystal structures of rCNL in complex with lactose and LDN, defining its interactions with the sugars. CNL is a homodimeric lectin, each of whose monomers comprises a single ricin B lectin domain with its beta-trefoil fold and one carbohydrate-binding site. In order to study the mode of CNL action, a non-sugar-binding mutant and non-dimerizing monovalent mutants that retain carbohydrate-binding activity were prepared. rCNL and the mutants were examined for their biological activities against Jurkat human leukemic T cells and the hypersensitive nematode Caenorhabditis elegans mutant strain pmk-1. rCNL was toxic against both, while the mutants were inactive. Thus, the bivalent carbohydrate-binding property of homodimeric CNL is essential for its activity, providing one of the rare pieces of evidence that certain activities of lectins are associated with their multivalency.
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==About this Structure==
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Bivalent carbohydrate binding is required for biological activity of CNL, the LacdiNAc (GalNAcbeta1-4GlcNAc)-specific lectin from basidiomycete Clitocybe nebularis.,Pohleven J, Renko M, Magister S, Smith DF, Kuenzler M, Strukelj B, Turk D, Kos J, Sabotic J J Biol Chem. 2012 Feb 1. PMID:22298779<ref>PMID:22298779</ref>
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[[3nbe]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/Cline Cline]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3NBE OCA].
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
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</div>
==See Also==
==See Also==
*[[Ricin|Ricin]]
*[[Ricin|Ricin]]
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== References ==
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==Reference==
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<references/>
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<ref group="xtra">PMID:022298779</ref><references group="xtra"/><references/>
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__TOC__
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</StructureSection>
[[Category: Cline]]
[[Category: Cline]]
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[[Category: Kos, J.]]
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[[Category: Kos, J]]
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[[Category: Pohleven, J.]]
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[[Category: Pohleven, J]]
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[[Category: Renko, M.]]
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[[Category: Renko, M]]
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[[Category: Sabotic, J.]]
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[[Category: Sabotic, J]]
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[[Category: Turk, D.]]
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[[Category: Turk, D]]
[[Category: Clitocybe nebularis ricin b-like lectin]]
[[Category: Clitocybe nebularis ricin b-like lectin]]
[[Category: N'-diacetyllactosediamine]]
[[Category: N'-diacetyllactosediamine]]
[[Category: Sugar binding protein]]
[[Category: Sugar binding protein]]

Revision as of 21:46, 3 January 2015

Clitocybe nebularis ricin B-like lectin (CNL) in complex with N,N'-diacetyllactosediamine

3nbe, resolution 1.86Å

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