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3wrc
From Proteopedia
(Difference between revisions)
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<StructureSection load='3wrc' size='340' side='right' caption='[[3wrc]], [[Resolution|resolution]] 2.40Å' scene=''> | <StructureSection load='3wrc' size='340' side='right' caption='[[3wrc]], [[Resolution|resolution]] 2.40Å' scene=''> | ||
== Structural highlights == | == Structural highlights == | ||
| - | <table><tr><td colspan='2'>[[3wrc]] is a 2 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WRC OCA]. <br> | + | <table><tr><td colspan='2'>[[3wrc]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacillus_devorans"_zimmermann_1890 "bacillus devorans" zimmermann 1890]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3WRC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3WRC FirstGlance]. <br> |
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DHB:3,4-DIHYDROXYBENZOIC+ACID'>DHB</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=DHB:3,4-DIHYDROXYBENZOIC+ACID'>DHB</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wku|3wku]], [[3wpm|3wpm]], [[3wr3|3wr3]], [[3wr4|3wr4]], [[3wr8|3wr8]], [[3wr9|3wr9]], [[3wra|3wra]], [[3wrb|3wrb]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3wku|3wku]], [[3wpm|3wpm]], [[3wr3|3wr3]], [[3wr4|3wr4]], [[3wr8|3wr8]], [[3wr9|3wr9]], [[3wra|3wra]], [[3wrb|3wrb]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/ | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">desB ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=13689 "Bacillus devorans" Zimmermann 1890])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wrc RCSB], [http://www.ebi.ac.uk/pdbsum/3wrc PDBsum]</span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Linoleate_9S-lipoxygenase Linoleate 9S-lipoxygenase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.13.11.58 1.13.11.58] </span></td></tr> |
| - | <table> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3wrc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3wrc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3wrc RCSB], [http://www.ebi.ac.uk/pdbsum/3wrc PDBsum]</span></td></tr> |
| + | </table> | ||
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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Molecular Mechanism of Strict Substrate Specificity of an Extradiol Dioxygenase, DesB, Derived from Sphingobium sp. SYK-6.,Sugimoto K, Senda M, Kasai D, Fukuda M, Masai E, Senda T PLoS One. 2014 Mar 21;9(3):e92249. doi: 10.1371/journal.pone.0092249. eCollection, 2014. PMID:24657997<ref>PMID:24657997</ref> | Molecular Mechanism of Strict Substrate Specificity of an Extradiol Dioxygenase, DesB, Derived from Sphingobium sp. SYK-6.,Sugimoto K, Senda M, Kasai D, Fukuda M, Masai E, Senda T PLoS One. 2014 Mar 21;9(3):e92249. doi: 10.1371/journal.pone.0092249. eCollection, 2014. PMID:24657997<ref>PMID:24657997</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
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__TOC__ | __TOC__ | ||
</StructureSection> | </StructureSection> | ||
| + | [[Category: Bacillus devorans zimmermann 1890]] | ||
[[Category: Linoleate 9S-lipoxygenase]] | [[Category: Linoleate 9S-lipoxygenase]] | ||
| - | [[Category: Fukuda, M | + | [[Category: Fukuda, M]] |
| - | [[Category: Kasai, D | + | [[Category: Kasai, D]] |
| - | [[Category: Masai, E | + | [[Category: Masai, E]] |
| - | [[Category: Senda, M | + | [[Category: Senda, M]] |
| - | [[Category: Senda, T | + | [[Category: Senda, T]] |
| - | [[Category: Sugimoto, K | + | [[Category: Sugimoto, K]] |
[[Category: Domain-swap dimer]] | [[Category: Domain-swap dimer]] | ||
[[Category: Extradiol dioxygenase]] | [[Category: Extradiol dioxygenase]] | ||
[[Category: Fe2+ binding]] | [[Category: Fe2+ binding]] | ||
[[Category: Oxidoreductase]] | [[Category: Oxidoreductase]] | ||
Revision as of 09:08, 4 January 2015
Crystal structure of the anaerobic DesB-Protocatechuate (PCA) complex
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