3zmr
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3zmr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacteroides_fragilis_subsp._ovatus"_(eggerth_and_gagnon_1933)_holdeman_and_moore_1970 "bacteroides fragilis subsp. ovatus" (eggerth and gagnon 1933) holdeman and moore 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZMR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZMR FirstGlance]. <br> | <table><tr><td colspan='2'>[[3zmr]] is a 2 chain structure with sequence from [http://en.wikipedia.org/wiki/"bacteroides_fragilis_subsp._ovatus"_(eggerth_and_gagnon_1933)_holdeman_and_moore_1970 "bacteroides fragilis subsp. ovatus" (eggerth and gagnon 1933) holdeman and moore 1970]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZMR OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZMR FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=XYS:XYLOPYRANOSE'>XYS</scene>, <scene name='pdbligand=GLO:D-GLUCOSE+IN+LINEAR+FORM'>GLO</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=BGC:BETA-D-GLUCOSE'>BGC</scene>, <scene name='pdbligand=BTB:2-[BIS-(2-HYDROXY-ETHYL)-AMINO]-2-HYDROXYMETHYL-PROPANE-1,3-DIOL'>BTB</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=GLC:ALPHA-D-GLUCOSE'>GLC</scene>, <scene name='pdbligand=XYS:XYLOPYRANOSE'>XYS</scene>, <scene name='pdbligand=GLO:D-GLUCOSE+IN+LINEAR+FORM'>GLO</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Xyloglucan-specific_endo-beta-1,4-glucanase Xyloglucan-specific endo-beta-1,4-glucanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.151 3.2.1.151] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Xyloglucan-specific_endo-beta-1,4-glucanase Xyloglucan-specific endo-beta-1,4-glucanase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.151 3.2.1.151] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zmr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zmr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zmr RCSB], [http://www.ebi.ac.uk/pdbsum/3zmr PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zmr FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zmr OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zmr RCSB], [http://www.ebi.ac.uk/pdbsum/3zmr PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
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A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes.,Larsbrink J, Rogers TE, Hemsworth GR, McKee LS, Tauzin AS, Spadiut O, Klinter S, Pudlo NA, Urs K, Koropatkin NM, Creagh AL, Haynes CA, Kelly AG, Cederholm SN, Davies GJ, Martens EC, Brumer H Nature. 2014 Jan 19. doi: 10.1038/nature12907. PMID:24463512<ref>PMID:24463512</ref> | A discrete genetic locus confers xyloglucan metabolism in select human gut Bacteroidetes.,Larsbrink J, Rogers TE, Hemsworth GR, McKee LS, Tauzin AS, Spadiut O, Klinter S, Pudlo NA, Urs K, Koropatkin NM, Creagh AL, Haynes CA, Kelly AG, Cederholm SN, Davies GJ, Martens EC, Brumer H Nature. 2014 Jan 19. doi: 10.1038/nature12907. PMID:24463512<ref>PMID:24463512</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
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</StructureSection> | </StructureSection> | ||
[[Category: Xyloglucan-specific endo-beta-1,4-glucanase]] | [[Category: Xyloglucan-specific endo-beta-1,4-glucanase]] | ||
| - | [[Category: Brumer, H | + | [[Category: Brumer, H]] |
| - | [[Category: Cederholm, S N | + | [[Category: Cederholm, S N]] |
| - | [[Category: Davies, G J | + | [[Category: Davies, G J]] |
| - | [[Category: Hemsworth, G R | + | [[Category: Hemsworth, G R]] |
| - | [[Category: Kelly, A G | + | [[Category: Kelly, A G]] |
| - | [[Category: Klinter, S | + | [[Category: Klinter, S]] |
| - | [[Category: Larsbrink, J | + | [[Category: Larsbrink, J]] |
| - | [[Category: Martens, E C | + | [[Category: Martens, E C]] |
| - | [[Category: McKee, L S | + | [[Category: McKee, L S]] |
| - | [[Category: Pudlo, N A | + | [[Category: Pudlo, N A]] |
| - | [[Category: Rogers, T E | + | [[Category: Rogers, T E]] |
| - | [[Category: Spadiut, O | + | [[Category: Spadiut, O]] |
| - | [[Category: Urs, K | + | [[Category: Urs, K]] |
[[Category: Hydrolase]] | [[Category: Hydrolase]] | ||
[[Category: Xyloglucan]] | [[Category: Xyloglucan]] | ||
Revision as of 09:31, 4 January 2015
Bacteroides ovatus GH5 xyloglucanase in complex with a XXXG heptasaccharide
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