3zg4

From Proteopedia

(Difference between revisions)
Jump to: navigation, search
Line 1: Line 1:
-
{{STRUCTURE_3zg4| PDB=3zg4 | SCENE= }}
+
==NMR structure of the catalytic domain from E. faecium L,D- transpeptidase==
-
===NMR structure of the catalytic domain from E. faecium L,D- transpeptidase===
+
<StructureSection load='3zg4' size='340' side='right' caption='[[3zg4]], [[NMR_Ensembles_of_Models | 20 NMR models]]' scene=''>
-
{{ABSTRACT_PUBMED_23574509}}
+
== Structural highlights ==
 +
<table><tr><td colspan='2'>[[3zg4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecium Enterococcus faecium]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZG4 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3ZG4 FirstGlance]. <br>
 +
</td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[3zgp|3zgp]]</td></tr>
 +
<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Peptidyltransferase Peptidyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.3.2.12 2.3.2.12] </span></td></tr>
 +
<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3zg4 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3zg4 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3zg4 RCSB], [http://www.ebi.ac.uk/pdbsum/3zg4 PDBsum]</span></td></tr>
 +
</table>
 +
<div style="background-color:#fffaf0;">
 +
== Publication Abstract from PubMed ==
 +
The maintenance of bacterial cell shape and integrity is largely attributed to peptidoglycan, a biopolymer highly cross-linked through d,d-transpeptidation. Peptidoglycan cross-linking is catalyzed by penicillin-binding proteins (PBPs) that are the essential target of beta-lactam antibiotics. PBPs are functionally replaced by l,d-transpeptidases (Ldts) in ampicillin-resistant mutants of Enterococcus faecium and in wild-type Mycobacterium tuberculosis. Ldts are inhibited in vivo by a single class of beta-lactams, the carbapenems, which act as a suicide substrate. We present here the first structure of a carbapenem-acylated l,d-transpeptidase, E. faecium Ldtfm acylated by ertapenem, which revealed key contacts between the carbapenem core and residues of the catalytic cavity of the enzyme. Significant reorganization of the antibiotic conformation occurs upon enzyme acylation. These results, together with the analysis of protein-to-carbapenem proton transfers, provide new insights into the mechanism of Ldt acylation by carbapenems.
-
==About this Structure==
+
Structure of Enterococcus faeciuml,d-Transpeptidase Acylated by Ertapenem Provides Insight into the Inactivation Mechanism.,Lecoq L, Dubee V, Triboulet S, Bougault C, Hugonnet JE, Arthur M, Simorre JP ACS Chem Biol. 2013 Apr 12. PMID:23574509<ref>PMID:23574509</ref>
-
[[3zg4]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Enterococcus_faecium Enterococcus faecium]. Full experimental information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3ZG4 OCA].
+
-
==Reference==
+
From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
-
<ref group="xtra">PMID:023574509</ref><references group="xtra"/><references/>
+
</div>
 +
== References ==
 +
<references/>
 +
__TOC__
 +
</StructureSection>
[[Category: Enterococcus faecium]]
[[Category: Enterococcus faecium]]
[[Category: Peptidyltransferase]]
[[Category: Peptidyltransferase]]
-
[[Category: Arthur, M.]]
+
[[Category: Arthur, M]]
-
[[Category: Bougault, C.]]
+
[[Category: Bougault, C]]
-
[[Category: Dubee, V.]]
+
[[Category: Dubee, V]]
-
[[Category: Hugonnet, J E.]]
+
[[Category: Hugonnet, J E]]
-
[[Category: Lecoq, L.]]
+
[[Category: Lecoq, L]]
-
[[Category: Simorre, J P.]]
+
[[Category: Simorre, J P]]
-
[[Category: Triboulet, S.]]
+
[[Category: Triboulet, S]]
[[Category: Antibiotic resistance]]
[[Category: Antibiotic resistance]]
[[Category: Peptidoglycan biosynthesis]]
[[Category: Peptidoglycan biosynthesis]]
[[Category: Transferase]]
[[Category: Transferase]]
[[Category: Transpeptidation]]
[[Category: Transpeptidation]]

Revision as of 10:21, 4 January 2015

NMR structure of the catalytic domain from E. faecium L,D- transpeptidase

Drag the structure with the mouse to rotate

Proteopedia Page Contributors and Editors (what is this?)

OCA

Personal tools