This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
3vge
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[3vge]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VGE FirstGlance]. <br> | <table><tr><td colspan='2'>[[3vge]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3VGE OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3VGE FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=FLC:CITRATE+ANION'>FLC</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1eh9|1eh9]], [[3vgc|3vgc]], [[3vgd|3vgd]], [[3vgf|3vgf]], [[3vgg|3vgg]], [[3vgh|3vgh]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1eh9|1eh9]], [[3vgc|3vgc]], [[3vgd|3vgd]], [[3vgf|3vgf]], [[3vgg|3vgg]], [[3vgh|3vgh]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">treZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])</td></tr> | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">treZ ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus])</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-alpha-D-((1->4)-alpha-D-glucano)trehalose_trehalohydrolase 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.141 3.2.1.141] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/4-alpha-D-((1->4)-alpha-D-glucano)trehalose_trehalohydrolase 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.2.1.141 3.2.1.141] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vge OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vge RCSB], [http://www.ebi.ac.uk/pdbsum/3vge PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3vge FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3vge OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3vge RCSB], [http://www.ebi.ac.uk/pdbsum/3vge PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
<div style="background-color:#fffaf0;"> | <div style="background-color:#fffaf0;"> | ||
== Publication Abstract from PubMed == | == Publication Abstract from PubMed == | ||
| Line 15: | Line 15: | ||
Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.,Okazaki N, Tamada T, Feese MD, Kato M, Miura Y, Komeda T, Kobayashi K, Kondo K, Blaber M, Kuroki R Protein Sci. 2012 Apr;21(4):539-52. doi: 10.1002/pro.2039. Epub 2012 Feb 28. PMID:22334583<ref>PMID:22334583</ref> | Substrate recognition mechanism of a glycosyltrehalose trehalohydrolase from Sulfolobus solfataricus KM1.,Okazaki N, Tamada T, Feese MD, Kato M, Miura Y, Komeda T, Kobayashi K, Kondo K, Blaber M, Kuroki R Protein Sci. 2012 Apr;21(4):539-52. doi: 10.1002/pro.2039. Epub 2012 Feb 28. PMID:22334583<ref>PMID:22334583</ref> | ||
| - | From | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
</div> | </div> | ||
== References == | == References == | ||
| Line 22: | Line 22: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Sulfolobus solfataricus]] | [[Category: Sulfolobus solfataricus]] | ||
| - | [[Category: Feese, M D | + | [[Category: Feese, M D]] |
| - | [[Category: Kato, M | + | [[Category: Kato, M]] |
| - | [[Category: Kobayashi, K | + | [[Category: Kobayashi, K]] |
| - | [[Category: Komeda, T | + | [[Category: Komeda, T]] |
| - | [[Category: Kondo, K | + | [[Category: Kondo, K]] |
| - | [[Category: Kuroki, R | + | [[Category: Kuroki, R]] |
| - | [[Category: Miura, Y | + | [[Category: Miura, Y]] |
| - | [[Category: Okazaki, N | + | [[Category: Okazaki, N]] |
| - | [[Category: Tamada, T | + | [[Category: Tamada, T]] |
[[Category: Alpha-amylase]] | [[Category: Alpha-amylase]] | ||
[[Category: Alpha/beta barrel]] | [[Category: Alpha/beta barrel]] | ||
Revision as of 10:23, 4 January 2015
Crystal structure of glycosyltrehalose trehalohydrolase (D252S)
| |||||||||||
