3v39

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== Structural highlights ==
== Structural highlights ==
<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>
<table><tr><td colspan='2'>[[3v39]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Bdellovibrio_bacteriovorus Bdellovibrio bacteriovorus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=3V39 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3V39 FirstGlance]. <br>
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</td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene><br>
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</td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=PGE:TRIETHYLENE+GLYCOL'>PGE</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene>, <scene name='pdbligand=TAU:2-AMINOETHANESULFONIC+ACID'>TAU</scene></td></tr>
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<tr><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 Bdellovibrio bacteriovorus])</td></tr>
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<tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Bd3459 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=959 Bdellovibrio bacteriovorus])</td></tr>
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<tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
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<tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Serine-type_D-Ala-D-Ala_carboxypeptidase Serine-type D-Ala-D-Ala carboxypeptidase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=3.4.16.4 3.4.16.4] </span></td></tr>
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<tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum]</span></td></tr>
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<tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=3v39 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=3v39 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=3v39 RCSB], [http://www.ebi.ac.uk/pdbsum/3v39 PDBsum]</span></td></tr>
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<table>
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</table>
<div style="background-color:#fffaf0;">
<div style="background-color:#fffaf0;">
== Publication Abstract from PubMed ==
== Publication Abstract from PubMed ==
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Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref>
Specialized peptidoglycan hydrolases sculpt the intra-bacterial niche of predatory Bdellovibrio and increase population fitness.,Lerner TR, Lovering AL, Bui NK, Uchida K, Aizawa S, Vollmer W, Sockett RE PLoS Pathog. 2012 Feb;8(2):e1002524. Epub 2012 Feb 9. PMID:22346754<ref>PMID:22346754</ref>
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From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br>
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From MEDLINE&reg;/PubMed&reg;, a database of the U.S. National Library of Medicine.<br>
</div>
</div>
== References ==
== References ==
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[[Category: Bdellovibrio bacteriovorus]]
[[Category: Bdellovibrio bacteriovorus]]
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
[[Category: Serine-type D-Ala-D-Ala carboxypeptidase]]
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[[Category: Lerner, T R.]]
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[[Category: Lerner, T R]]
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[[Category: Lovering, A L.]]
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[[Category: Lovering, A L]]
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[[Category: Sockett, R E.]]
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[[Category: Sockett, R E]]
[[Category: Endopeptidase]]
[[Category: Endopeptidase]]
[[Category: Hydrolase]]
[[Category: Hydrolase]]
[[Category: Peptidoglycan transpeptidase fold]]
[[Category: Peptidoglycan transpeptidase fold]]
[[Category: Serine modified by hepes buffer molecule]]
[[Category: Serine modified by hepes buffer molecule]]

Revision as of 10:42, 4 January 2015

Bd3459, A Predatory Peptidoglycan Endopeptidase from Bdellovibrio bacteriovorus

3v39, resolution 1.45Å

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