This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
4ihc
From Proteopedia
(Difference between revisions)
| Line 1: | Line 1: | ||
| - | + | ==Crystal structure of probable mannonate dehydratase Dd703_0947 (target EFI-502222) from Dickeya dadantii Ech703== | |
| - | + | <StructureSection load='4ihc' size='340' side='right' caption='[[4ihc]], [[Resolution|resolution]] 2.00Å' scene=''> | |
| - | + | == Structural highlights == | |
| - | + | <table><tr><td colspan='2'>[[4ihc]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Dickeya_dadantii_ech703 Dickeya dadantii ech703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IHC OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4IHC FirstGlance]. <br> | |
| - | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CL:CHLORIDE+ION'>CL</scene>, <scene name='pdbligand=FMT:FORMIC+ACID'>FMT</scene>, <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene>, <scene name='pdbligand=IOD:IODIDE+ION'>IOD</scene>, <scene name='pdbligand=MG:MAGNESIUM+ION'>MG</scene></td></tr> | |
| - | + | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">Dd703_0947 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=579405 Dickeya dadantii Ech703])</td></tr> | |
| - | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4ihc FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4ihc OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4ihc RCSB], [http://www.ebi.ac.uk/pdbsum/4ihc PDBsum]</span></td></tr> | |
| - | == | + | </table> |
| - | [[4ihc]] is a 8 chain structure with sequence from [http://en.wikipedia.org/wiki/Dickeya_dadantii_ech703 Dickeya dadantii ech703]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4IHC OCA]. | + | == Function == |
| + | [[http://www.uniprot.org/uniprot/C6CBG9_DICDC C6CBG9_DICDC]] Has low dehydratase activity with D-mannonate and D-gluconate, suggesting that these are not physiological substrates and that it has no significant role in the in vivo degradation of these compounds. Has no detectable activity with a panel of 70 other acid sugars (in vitro).<ref>PMID:24697546</ref> | ||
| + | == References == | ||
| + | <references/> | ||
| + | __TOC__ | ||
| + | </StructureSection> | ||
[[Category: Dickeya dadantii ech703]] | [[Category: Dickeya dadantii ech703]] | ||
| - | [[Category: Almo, S C | + | [[Category: Almo, S C]] |
| - | [[Category: Bhosle, R | + | [[Category: Bhosle, R]] |
| - | [[Category: Chowdhury, S | + | [[Category: Chowdhury, S]] |
| - | [[Category: EFI, Enzyme Function Initiative | + | [[Category: EFI, Enzyme Function Initiative]] |
| - | [[Category: Evans, B | + | [[Category: Evans, B]] |
| - | [[Category: Gerlt, J A | + | [[Category: Gerlt, J A]] |
| - | [[Category: Glenn, A Scott | + | [[Category: Glenn, A Scott]] |
| - | [[Category: Hammonds, J | + | [[Category: Hammonds, J]] |
| - | [[Category: Hillerich, B | + | [[Category: Hillerich, B]] |
| - | [[Category: Imker, H J | + | [[Category: Imker, H J]] |
| - | [[Category: Love, J | + | [[Category: Love, J]] |
| - | [[Category: Obaidi, N F.Al | + | [[Category: Obaidi, N F.Al]] |
| - | [[Category: Patskovsky, Y | + | [[Category: Patskovsky, Y]] |
| - | [[Category: Seidel, R D | + | [[Category: Seidel, R D]] |
| - | [[Category: Stead, M | + | [[Category: Stead, M]] |
| - | [[Category: Toro, R | + | [[Category: Toro, R]] |
| - | [[Category: Washington, E | + | [[Category: Washington, E]] |
| - | [[Category: Zencheck, W D | + | [[Category: Zencheck, W D]] |
[[Category: Dehydratase]] | [[Category: Dehydratase]] | ||
[[Category: Efi]] | [[Category: Efi]] | ||
Revision as of 12:57, 4 January 2015
Crystal structure of probable mannonate dehydratase Dd703_0947 (target EFI-502222) from Dickeya dadantii Ech703
| |||||||||||
Categories: Dickeya dadantii ech703 | Almo, S C | Bhosle, R | Chowdhury, S | EFI, Enzyme Function Initiative | Evans, B | Gerlt, J A | Glenn, A Scott | Hammonds, J | Hillerich, B | Imker, H J | Love, J | Obaidi, N F.Al | Patskovsky, Y | Seidel, R D | Stead, M | Toro, R | Washington, E | Zencheck, W D | Dehydratase | Efi | Enzyme function initiative | Isomerase | Magnesium binding | Structural genomic
