2ibk
From Proteopedia
(Difference between revisions)
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| - | [[Image:2ibk.gif|left|200px]] | + | [[Image:2ibk.gif|left|200px]] |
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| - | '''Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap''' | + | {{Structure |
| + | |PDB= 2ibk |SIZE=350|CAPTION= <scene name='initialview01'>2ibk</scene>, resolution 2.25Å | ||
| + | |SITE= | ||
| + | |LIGAND= <scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=BAP:1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE'>BAP</scene>, <scene name='pdbligand=EDO:1,2-ETHANEDIOL'>EDO</scene>, <scene name='pdbligand=POP:PYROPHOSPHATE+2-'>POP</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | ||
| + | |ACTIVITY= [http://en.wikipedia.org/wiki/DNA-directed_DNA_polymerase DNA-directed DNA polymerase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.7.7 2.7.7.7] | ||
| + | |GENE= dbh, dpo4 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=2287 Sulfolobus solfataricus]) | ||
| + | }} | ||
| + | |||
| + | '''Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap''' | ||
| + | |||
==About this Structure== | ==About this Structure== | ||
| - | 2IBK is a [ | + | 2IBK is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Sulfolobus_solfataricus Sulfolobus solfataricus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IBK OCA]. |
[[Category: DNA-directed DNA polymerase]] | [[Category: DNA-directed DNA polymerase]] | ||
[[Category: Single protein]] | [[Category: Single protein]] | ||
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[[Category: translesion synthesis]] | [[Category: translesion synthesis]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:27:32 2008'' |
Revision as of 15:27, 20 March 2008
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| , resolution 2.25Å | |||||||
|---|---|---|---|---|---|---|---|
| Ligands: | , , , and | ||||||
| Gene: | dbh, dpo4 (Sulfolobus solfataricus) | ||||||
| Activity: | DNA-directed DNA polymerase, with EC number 2.7.7.7 | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Bypass of Major Benzopyrene-dG Adduct by Y-Family DNA Polymerase with Unique Structural Gap
About this Structure
2IBK is a Single protein structure of sequence from Sulfolobus solfataricus. Full crystallographic information is available from OCA.
Page seeded by OCA on Thu Mar 20 17:27:32 2008
Categories: DNA-directed DNA polymerase | Single protein | Sulfolobus solfataricus | Bauer, J A. | Jerina, D M. | Ling, H. | Sayer, J M. | Xing, G. | Yagi, H. | BAP | CA | EDO | GOL | POP | Benzo pyrene | Carcinogen | Dpo4 | Lesion bypass | Polymerase | Transferase/dna complex | Translesion synthesis
