2ig3

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[[Image:2ig3.gif|left|200px]]<br /><applet load="2ig3" size="350" color="white" frame="true" align="right" spinBox="true"
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[[Image:2ig3.gif|left|200px]]
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caption="2ig3, resolution 2.15&Aring;" />
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'''Crystal structure of group III truncated hemoglobin from Campylobacter jejuni'''<br />
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{{Structure
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|PDB= 2ig3 |SIZE=350|CAPTION= <scene name='initialview01'>2ig3</scene>, resolution 2.15&Aring;
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|SITE=
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|LIGAND= <scene name='pdbligand=CYN:CYANIDE+ION'>CYN</scene>, <scene name='pdbligand=ACT:ACETATE+ION'>ACT</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=HEM:PROTOPORPHYRIN IX CONTAINING FE'>HEM</scene>
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|ACTIVITY=
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|GENE= ctb ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=197 Campylobacter jejuni])
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}}
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'''Crystal structure of group III truncated hemoglobin from Campylobacter jejuni'''
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==Overview==
==Overview==
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==About this Structure==
==About this Structure==
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2IG3 is a [http://en.wikipedia.org/wiki/Single_protein Single protein] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni] with <scene name='pdbligand=CYN:'>CYN</scene>, <scene name='pdbligand=ACT:'>ACT</scene>, <scene name='pdbligand=SO4:'>SO4</scene> and <scene name='pdbligand=HEM:'>HEM</scene> as [http://en.wikipedia.org/wiki/ligands ligands]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IG3 OCA].
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2IG3 is a [[Single protein]] structure of sequence from [http://en.wikipedia.org/wiki/Campylobacter_jejuni Campylobacter jejuni]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2IG3 OCA].
==Reference==
==Reference==
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Structural determinants in the group III truncated hemoglobin from Campylobacter jejuni., Nardini M, Pesce A, Labarre M, Richard C, Bolli A, Ascenzi P, Guertin M, Bolognesi M, J Biol Chem. 2006 Dec 8;281(49):37803-12. Epub 2006 Oct 5. PMID:[http://ispc.weizmann.ac.il//pmbin/getpm?pmid=17023416 17023416]
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Structural determinants in the group III truncated hemoglobin from Campylobacter jejuni., Nardini M, Pesce A, Labarre M, Richard C, Bolli A, Ascenzi P, Guertin M, Bolognesi M, J Biol Chem. 2006 Dec 8;281(49):37803-12. Epub 2006 Oct 5. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17023416 17023416]
[[Category: Campylobacter jejuni]]
[[Category: Campylobacter jejuni]]
[[Category: Single protein]]
[[Category: Single protein]]
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[[Category: truncated hemoglobin]]
[[Category: truncated hemoglobin]]
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Feb 21 17:52:18 2008''
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''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 17:29:05 2008''

Revision as of 15:29, 20 March 2008

Image:2ig3.gif


PDB ID 2ig3

Drag the structure with the mouse to rotate
, resolution 2.15Å
Ligands: , , and
Gene: ctb (Campylobacter jejuni)
Coordinates: save as pdb, mmCIF, xml



Crystal structure of group III truncated hemoglobin from Campylobacter jejuni


Overview

Truncated hemoglobins (trHbs) constitute a distinct lineage in the globin superfamily, distantly related in size and fold to myoglobin and monomeric hemoglobins. Their phylogenetic analyses revealed that three groups (I, II, and III) compose the trHb family. Group I and II trHbs adopt a simplified globin fold, essentially composed of a 2-on-2 alpha-helical sandwich, wrapped around the heme group. So far no structural data have been reported for group III trHbs. Here we report the three-dimensional structure of the group III trHbP from the eubacterium Campylobacter jejuni. The 2.15-A resolution crystal structure of C. jejuni trHbP (cyano-met form) shows that the 2-on-2 trHb fold is substantially conserved in the trHb group III, despite the absence of the Gly-based sequence motifs that were considered necessary for the attainment of the trHb specific fold. The heme crevice presents important structural modifications in the C-E region and in the FG helical hinge, with novel surface clefts at the proximal heme site. Contrary to what has been observed for group I and II trHbs, no protein matrix tunnel/cavity system is evident in C. jejuni trHbP. A gating movement of His(E7) side chain (found in two alternate conformations in the crystal structure) may be instrumental for ligand entry to the heme distal site. Sequence conservation allows extrapolating part of the structural results here reported to the whole trHb group III.

About this Structure

2IG3 is a Single protein structure of sequence from Campylobacter jejuni. Full crystallographic information is available from OCA.

Reference

Structural determinants in the group III truncated hemoglobin from Campylobacter jejuni., Nardini M, Pesce A, Labarre M, Richard C, Bolli A, Ascenzi P, Guertin M, Bolognesi M, J Biol Chem. 2006 Dec 8;281(49):37803-12. Epub 2006 Oct 5. PMID:17023416

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