This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
1vk1
From Proteopedia
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[1vk1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VK1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VK1 FirstGlance]. <br> | <table><tr><td colspan='2'>[[1vk1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Pyrococcus_furiosus Pyrococcus furiosus]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=1VK1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1VK1 FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PEG:DI(HYDROXYETHYL)ETHER'>PEG</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr> | + | <tr id='NonStdRes'><td class="sblockLbl"><b>[[Non-Standard_Residue|NonStd Res:]]</b></td><td class="sblockDat"><scene name='pdbligand=MLY:N-DIMETHYL-LYSINE'>MLY</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vk1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vk1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vk1 RCSB], [http://www.ebi.ac.uk/pdbsum/1vk1 PDBsum], [http://www.topsan.org/Proteins/SECSG/1vk1 TOPSAN]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=1vk1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=1vk1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=1vk1 RCSB], [http://www.ebi.ac.uk/pdbsum/1vk1 PDBsum], [http://www.topsan.org/Proteins/SECSG/1vk1 TOPSAN]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 30: | Line 30: | ||
</StructureSection> | </StructureSection> | ||
[[Category: Pyrococcus furiosus]] | [[Category: Pyrococcus furiosus]] | ||
| - | [[Category: Adams, M W.W | + | [[Category: Adams, M W.W]] |
| - | [[Category: Brereton, P S | + | [[Category: Brereton, P S]] |
| - | [[Category: Chang, J | + | [[Category: Chang, J]] |
| - | [[Category: Chen, L | + | [[Category: Chen, L]] |
| - | [[Category: II, F L.Poole | + | [[Category: II, F L.Poole]] |
| - | [[Category: Izumi, M | + | [[Category: Izumi, M]] |
| - | [[Category: Jenney, F E | + | [[Category: Jenney, F E]] |
| - | [[Category: Lee, D | + | [[Category: Lee, D]] |
| - | [[Category: Liu, Z J | + | [[Category: Liu, Z J]] |
| - | [[Category: Ng, J | + | [[Category: Ng, J]] |
| - | [[Category: Richardson, D C | + | [[Category: Richardson, D C]] |
| - | [[Category: Richardson, J S | + | [[Category: Richardson, J S]] |
| - | [[Category: Rose, J | + | [[Category: Rose, J]] |
| - | [[Category: | + | [[Category: Structural genomic]] |
| - | [[Category: Shah, A | + | [[Category: Shah, A]] |
| - | [[Category: Shah, C | + | [[Category: Shah, C]] |
| - | [[Category: Sugar, F J | + | [[Category: Sugar, F J]] |
| - | [[Category: Tempel, W | + | [[Category: Tempel, W]] |
| - | [[Category: Wang, B C | + | [[Category: Wang, B C]] |
| - | [[Category: Yang, H | + | [[Category: Yang, H]] |
| - | [[Category: Zhao, M | + | [[Category: Zhao, M]] |
[[Category: Conserved hypothetical protein]] | [[Category: Conserved hypothetical protein]] | ||
[[Category: Dimethyl lysine]] | [[Category: Dimethyl lysine]] | ||
| - | [[Category: Protein structure initiative | + | [[Category: PSI, Protein structure initiative]] |
| - | + | ||
| - | + | ||
[[Category: Reductive methylation]] | [[Category: Reductive methylation]] | ||
[[Category: Secsg]] | [[Category: Secsg]] | ||
| - | [[Category: Southeast collaboratory for structural genomic]] | ||
| - | [[Category: Structural genomic]] | ||
[[Category: Unknown function]] | [[Category: Unknown function]] | ||
Revision as of 13:02, 6 January 2015
Conserved hypothetical protein from Pyrococcus furiosus Pfu-392566-001
| |||||||||||
Categories: Pyrococcus furiosus | Adams, M W.W | Brereton, P S | Chang, J | Chen, L | II, F L.Poole | Izumi, M | Jenney, F E | Lee, D | Liu, Z J | Ng, J | Richardson, D C | Richardson, J S | Rose, J | Structural genomic | Shah, A | Shah, C | Sugar, F J | Tempel, W | Wang, B C | Yang, H | Zhao, M | Conserved hypothetical protein | Dimethyl lysine | PSI, Protein structure initiative | Reductive methylation | Secsg | Unknown function

