4qqu
From Proteopedia
(Difference between revisions)
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- | ''' | + | ==Crystal structure of the cobalamin-independent methionine synthase enzyme in a closed conformation== |
+ | <StructureSection load='4qqu' size='340' side='right' caption='[[4qqu]], [[Resolution|resolution]] 2.98Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4qqu]] is a 1 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4QQU OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4QQU FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=39S:N-[4-({[(6S)-2-AMINO-4-OXO-3,4,5,6,7,8-HEXAHYDROPTERIDIN-6-YL]METHYL}AMINO)BENZOYL]-L-GAMMA-GLUTAMYL-L-GAMMA-GLUTAMYL-L-GLUTAMIC+ACID'>39S</scene>, <scene name='pdbligand=HCS:2-AMINO-4-MERCAPTO-BUTYRIC+ACID'>HCS</scene>, <scene name='pdbligand=PO4:PHOSPHATE+ION'>PO4</scene>, <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene></td></tr> | ||
+ | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/5-methyltetrahydropteroyltriglutamate--homocysteine_S-methyltransferase 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.1.1.14 2.1.1.14] </span></td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4qqu FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4qqu OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4qqu RCSB], [http://www.ebi.ac.uk/pdbsum/4qqu PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | == Function == | ||
+ | [[http://www.uniprot.org/uniprot/METE_CANAL METE_CANAL]] Catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine resulting in methionine formation.[HAMAP-Rule:MF_00172] | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | The cobalamin-independent methionine synthase enzyme catalyzes a challenging reaction: the direct transfer of a methyl from 5-methyl-tetrahydrofolate-glutamate3 to the l-homocysteine thiol. The enzyme has a dual (betaalpha)8 TIM barrel structure that binds, activates and brings the reactants into reaction proximity by conformational movements. In the previously observed open structures, the substrates bind too far apart to react, but we have captured a ternary complex with both substrates bound in a closed form of the enzyme. The closing is described in terms of a hinge between the N- and C-terminal TIM barrels and a rearrangement of key loops within the C domain. The substrate specificity can now be rationalized and the structure reveals His707 as the acid that protonates the THF leaving group through a water molecule trapped in the closed active site. The substrates are correctly oriented for an in-line attack by l-homocysteine on the N5-methyl. | ||
- | The | + | The Cobalamin-Independent Methionine Synthase Enzyme Captured in a Substrate-Induced Closed Conformation.,Ubhi DK, Robertus JD J Mol Biol. 2014 Dec 27. pii: S0022-2836(14)00649-4. doi:, 10.1016/j.jmb.2014.12.014. PMID:25545590<ref>PMID:25545590</ref> |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | [[Category: | + | <references/> |
- | [[Category: Ubhi, D | + | __TOC__ |
- | [[Category: | + | </StructureSection> |
+ | [[Category: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase]] | ||
+ | [[Category: Robertus, J D]] | ||
+ | [[Category: Ubhi, D K]] | ||
+ | [[Category: Closed conformation]] | ||
+ | [[Category: Cobalamin-independent]] | ||
+ | [[Category: Dual tim barrel]] | ||
+ | [[Category: Fungal]] | ||
+ | [[Category: Methionine synthase]] | ||
+ | [[Category: Surface entropy reduction]] | ||
+ | [[Category: Transferase]] |
Revision as of 13:34, 14 January 2015
Crystal structure of the cobalamin-independent methionine synthase enzyme in a closed conformation
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