This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2ji1
From Proteopedia
(Difference between revisions)
| Line 3: | Line 3: | ||
== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2ji1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfarculus_baarsii Desulfarculus baarsii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JI1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JI1 FirstGlance]. <br> | <table><tr><td colspan='2'>[[2ji1]] is a 4 chain structure with sequence from [http://en.wikipedia.org/wiki/Desulfarculus_baarsii Desulfarculus baarsii]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2JI1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2JI1 FirstGlance]. <br> | ||
| - | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=CA:CALCIUM+ION'>CA</scene>, <scene name='pdbligand=FE:FE+(III)+ION'>FE</scene>, <scene name='pdbligand=FE2:FE+(II)+ION'>FE2</scene></td></tr> |
| - | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vzg|1vzg]], [[1vzh|1vzh]], [[1vzi|1vzi]], [[2ji2|2ji2]], [[2ji3|2ji3]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1vzg|1vzg]], [[1vzh|1vzh]], [[1vzi|1vzi]], [[2ji2|2ji2]], [[2ji3|2ji3]]</td></tr> |
| - | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_reductase Superoxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.2 1.15.1.2] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Superoxide_reductase Superoxide reductase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=1.15.1.2 1.15.1.2] </span></td></tr> |
| - | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ji1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ji1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ji1 RCSB], [http://www.ebi.ac.uk/pdbsum/2ji1 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2ji1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2ji1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2ji1 RCSB], [http://www.ebi.ac.uk/pdbsum/2ji1 PDBsum]</span></td></tr> |
| - | <table> | + | </table> |
== Evolutionary Conservation == | == Evolutionary Conservation == | ||
[[Image:Consurf_key_small.gif|200px|right]] | [[Image:Consurf_key_small.gif|200px|right]] | ||
| Line 35: | Line 35: | ||
[[Category: Desulfarculus baarsii]] | [[Category: Desulfarculus baarsii]] | ||
[[Category: Superoxide reductase]] | [[Category: Superoxide reductase]] | ||
| - | [[Category: Adam, V | + | [[Category: Adam, V]] |
| - | [[Category: Amara, P | + | [[Category: Amara, P]] |
| - | [[Category: Bourgeois, D | + | [[Category: Bourgeois, D]] |
| - | [[Category: Carpentier, P | + | [[Category: Carpentier, P]] |
| - | [[Category: Katona, G | + | [[Category: Katona, G]] |
| - | [[Category: Niviere, V | + | [[Category: Niviere, V]] |
| - | [[Category: Ohana, J | + | [[Category: Ohana, J]] |
| - | [[Category: Tsanov, N | + | [[Category: Tsanov, N]] |
[[Category: Detoxification]] | [[Category: Detoxification]] | ||
[[Category: Electron transport]] | [[Category: Electron transport]] | ||
| Line 52: | Line 52: | ||
[[Category: Raman spectroscopy]] | [[Category: Raman spectroscopy]] | ||
[[Category: Redox state]] | [[Category: Redox state]] | ||
| - | [[Category: Superoxide reductase]] | ||
[[Category: Transport]] | [[Category: Transport]] | ||
Revision as of 17:32, 19 January 2015
X-RAY STRUCTURE OF WILD-TYPE SUPEROXIDE REDUCTASE FROM DESULFOARCULUS BAARSII
| |||||||||||
Categories: Desulfarculus baarsii | Superoxide reductase | Adam, V | Amara, P | Bourgeois, D | Carpentier, P | Katona, G | Niviere, V | Ohana, J | Tsanov, N | Detoxification | Electron transport | Intermediate trapping | Iron | Metal-binding | Microspectrophotometry | Oxidoreductase | Raman spectroscopy | Redox state | Transport
