2wd1
From Proteopedia
(Difference between revisions)
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== Structural highlights == | == Structural highlights == | ||
<table><tr><td colspan='2'>[[2wd1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WD1 FirstGlance]. <br> | <table><tr><td colspan='2'>[[2wd1]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2WD1 OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2WD1 FirstGlance]. <br> | ||
- | </td></tr><tr><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GBL:GAMMA-BUTYROLACTONE'>GBL</scene>, <scene name='pdbligand=ZZY:1-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDE'>ZZY</scene>< | + | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=GBL:GAMMA-BUTYROLACTONE'>GBL</scene>, <scene name='pdbligand=ZZY:1-[(2-NITROPHENYL)SULFONYL]-1H-PYRROLO[3,2-B]PYRIDINE-6-CARBOXAMIDE'>ZZY</scene></td></tr> |
- | <tr><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1r1w|1r1w]], [[1ux3|1ux3]], [[1fyr|1fyr]], [[1shy|1shy]], [[2uzx|2uzx]], [[2cew|2cew]], [[2uzy|2uzy]], [[2g15|2g15]], [[1ssl|1ssl]], [[1r0p|1r0p]]</td></tr> | + | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[1r1w|1r1w]], [[1ux3|1ux3]], [[1fyr|1fyr]], [[1shy|1shy]], [[2uzx|2uzx]], [[2cew|2cew]], [[2uzy|2uzy]], [[2g15|2g15]], [[1ssl|1ssl]], [[1r0p|1r0p]]</td></tr> |
- | <tr><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Receptor_protein-tyrosine_kinase Receptor protein-tyrosine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 2.7.10.1] </span></td></tr> | + | <tr id='activity'><td class="sblockLbl"><b>Activity:</b></td><td class="sblockDat"><span class='plainlinks'>[http://en.wikipedia.org/wiki/Receptor_protein-tyrosine_kinase Receptor protein-tyrosine kinase], with EC number [http://www.brenda-enzymes.info/php/result_flat.php4?ecno=2.7.10.1 2.7.10.1] </span></td></tr> |
- | <tr><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wd1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wd1 RCSB], [http://www.ebi.ac.uk/pdbsum/2wd1 PDBsum]</span></td></tr> | + | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=2wd1 FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=2wd1 OCA], [http://www.rcsb.org/pdb/explore.do?structureId=2wd1 RCSB], [http://www.ebi.ac.uk/pdbsum/2wd1 PDBsum]</span></td></tr> |
- | <table> | + | </table> |
== Disease == | == Disease == | ||
[[http://www.uniprot.org/uniprot/MET_HUMAN MET_HUMAN]] Note=Activation of MET after rearrangement with the TPR gene produces an oncogenic protein. Note=Defects in MET may be associated with gastric cancer. Defects in MET are a cause of hepatocellular carcinoma (HCC) [MIM:[http://omim.org/entry/114550 114550]].<ref>PMID:9927037</ref> Defects in MET are a cause of renal cell carcinoma papillary (RCCP) [MIM:[http://omim.org/entry/605074 605074]]. It is a subtype of renal cell carcinoma tending to show a tubulo-papillary architecture formed by numerous, irregular, finger-like projections of connective tissue. Renal cell carcinoma is a heterogeneous group of sporadic or hereditary carcinoma derived from cells of the proximal renal tubular epithelium. It is subclassified into common renal cell carcinoma (clear cell, non-papillary carcinoma), papillary renal cell carcinoma, chromophobe renal cell carcinoma, collecting duct carcinoma with medullary carcinoma of the kidney, and unclassified renal cell carcinoma.<ref>PMID:9140397</ref> <ref>PMID:9563489</ref> <ref>PMID:10433944</ref> <ref>PMID:10417759</ref> <ref>PMID:10327054</ref> Note=A common allele in the promoter region of the MET shows genetic association with susceptibility to autism in some families. Functional assays indicate a decrease in MET promoter activity and altered binding of specific transcription factor complexes. Note=MET activating mutations may be involved in the development of a highly malignant, metastatic syndrome known as cancer of unknown primary origin (CUP) or primary occult malignancy. Systemic neoplastic spread is generally a late event in cancer progression. However, in some instances, distant dissemination arises at a very early stage, so that metastases reach clinical relevance before primary lesions. Sometimes, the primary lesions cannot be identified in spite of the progresses in the diagnosis of malignancies.<ref>PMID:20949619</ref> | [[http://www.uniprot.org/uniprot/MET_HUMAN MET_HUMAN]] Note=Activation of MET after rearrangement with the TPR gene produces an oncogenic protein. Note=Defects in MET may be associated with gastric cancer. Defects in MET are a cause of hepatocellular carcinoma (HCC) [MIM:[http://omim.org/entry/114550 114550]].<ref>PMID:9927037</ref> Defects in MET are a cause of renal cell carcinoma papillary (RCCP) [MIM:[http://omim.org/entry/605074 605074]]. It is a subtype of renal cell carcinoma tending to show a tubulo-papillary architecture formed by numerous, irregular, finger-like projections of connective tissue. Renal cell carcinoma is a heterogeneous group of sporadic or hereditary carcinoma derived from cells of the proximal renal tubular epithelium. It is subclassified into common renal cell carcinoma (clear cell, non-papillary carcinoma), papillary renal cell carcinoma, chromophobe renal cell carcinoma, collecting duct carcinoma with medullary carcinoma of the kidney, and unclassified renal cell carcinoma.<ref>PMID:9140397</ref> <ref>PMID:9563489</ref> <ref>PMID:10433944</ref> <ref>PMID:10417759</ref> <ref>PMID:10327054</ref> Note=A common allele in the promoter region of the MET shows genetic association with susceptibility to autism in some families. Functional assays indicate a decrease in MET promoter activity and altered binding of specific transcription factor complexes. Note=MET activating mutations may be involved in the development of a highly malignant, metastatic syndrome known as cancer of unknown primary origin (CUP) or primary occult malignancy. Systemic neoplastic spread is generally a late event in cancer progression. However, in some instances, distant dissemination arises at a very early stage, so that metastases reach clinical relevance before primary lesions. Sometimes, the primary lesions cannot be identified in spite of the progresses in the diagnosis of malignancies.<ref>PMID:20949619</ref> | ||
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[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Receptor protein-tyrosine kinase]] | [[Category: Receptor protein-tyrosine kinase]] | ||
- | [[Category: Batchelor, M | + | [[Category: Batchelor, M]] |
- | [[Category: Calmiano, M | + | [[Category: Calmiano, M]] |
- | [[Category: Delgado, J | + | [[Category: Delgado, J]] |
- | [[Category: Edwards, H | + | [[Category: Edwards, H]] |
- | [[Category: Foley, A | + | [[Category: Foley, A]] |
- | [[Category: Franklin, R J | + | [[Category: Franklin, R J]] |
- | [[Category: Gascon-Simorte, J M | + | [[Category: Gascon-Simorte, J M]] |
- | [[Category: Keyaerts, J | + | [[Category: Keyaerts, J]] |
- | [[Category: King, L | + | [[Category: King, L]] |
- | [[Category: Lallemand, B | + | [[Category: Lallemand, B]] |
- | [[Category: Lecomte, F | + | [[Category: Lecomte, F]] |
- | [[Category: Lumb, S | + | [[Category: Lumb, S]] |
- | [[Category: Maloney, A | + | [[Category: Maloney, A]] |
- | [[Category: Meier, C | + | [[Category: Meier, C]] |
- | [[Category: Porter, J | + | [[Category: Porter, J]] |
- | [[Category: Reuberson, J | + | [[Category: Reuberson, J]] |
- | [[Category: Riche, K Le | + | [[Category: Riche, K Le]] |
[[Category: Atp-binding]] | [[Category: Atp-binding]] | ||
[[Category: Azaindole]] | [[Category: Azaindole]] |
Revision as of 09:31, 20 January 2015
HUMAN C-MET KINASE IN COMPLEX WITH AZAINDOLE INHIBITOR
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Categories: Homo sapiens | Receptor protein-tyrosine kinase | Batchelor, M | Calmiano, M | Delgado, J | Edwards, H | Foley, A | Franklin, R J | Gascon-Simorte, J M | Keyaerts, J | King, L | Lallemand, B | Lecomte, F | Lumb, S | Maloney, A | Meier, C | Porter, J | Reuberson, J | Riche, K Le | Atp-binding | Azaindole | C-met | Human kinase | Inhibitor | Kinase | Nucleotide-binding | Transferase | Tyrosine-protein kinase