This old version of Proteopedia is provided for student assignments while the new version is undergoing repairs. Content and edits done in this old version of Proteopedia after March 1, 2026 will eventually be lost when it is retired in about June of 2026.
Apply for new accounts at the new Proteopedia. Your logins will work in both the old and new versions.
2opf
From Proteopedia
(Difference between revisions)
(New page: 200px<br /><applet load="2opf" size="350" color="white" frame="true" align="right" spinBox="true" caption="2opf, resolution 1.85Å" /> '''Crystal structure of...) |
|||
| Line 1: | Line 1: | ||
| - | [[Image:2opf.jpg|left|200px]] | + | [[Image:2opf.jpg|left|200px]] |
| - | + | ||
| - | '''Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrate''' | + | {{Structure |
| + | |PDB= 2opf |SIZE=350|CAPTION= <scene name='initialview01'>2opf</scene>, resolution 1.85Å | ||
| + | |SITE= <scene name='pdbsite=AC1:Ped+Binding+Site+For+Residue+C+427'>AC1</scene>, <scene name='pdbsite=AC2:Zn+Binding+Site+For+Residue+A+501'>AC2</scene>, <scene name='pdbsite=AC3:So4+Binding+Site+For+Residue+A+601'>AC3</scene>, <scene name='pdbsite=AC4:Gol+Binding+Site+For+Residue+A+701'>AC4</scene>, <scene name='pdbsite=AC5:Gol+Binding+Site+For+Residue+C+702'>AC5</scene>, <scene name='pdbsite=AC6:Gol+Binding+Site+For+Residue+A+703'>AC6</scene>, <scene name='pdbsite=AC7:Gol+Binding+Site+For+Residue+A+704'>AC7</scene> and <scene name='pdbsite=AC8:Gol+Binding+Site+For+Residue+A+705'>AC8</scene> | ||
| + | |LIGAND= <scene name='pdbligand=ZN:ZINC+ION'>ZN</scene>, <scene name='pdbligand=SO4:SULFATE+ION'>SO4</scene> and <scene name='pdbligand=GOL:GLYCEROL'>GOL</scene> | ||
| + | |ACTIVITY= | ||
| + | |GENE= nei ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=562 Escherichia coli]) | ||
| + | }} | ||
| + | |||
| + | '''Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrate''' | ||
| + | |||
==About this Structure== | ==About this Structure== | ||
| - | 2OPF is a [ | + | 2OPF is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Escherichia_coli Escherichia coli]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2OPF OCA]. |
[[Category: Escherichia coli]] | [[Category: Escherichia coli]] | ||
[[Category: Protein complex]] | [[Category: Protein complex]] | ||
| Line 23: | Line 32: | ||
[[Category: reaction mechanism]] | [[Category: reaction mechanism]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:02:44 2008'' |
Revision as of 16:02, 20 March 2008
| |||||||
| , resolution 1.85Å | |||||||
|---|---|---|---|---|---|---|---|
| Sites: | , , , , , , and | ||||||
| Ligands: | , and | ||||||
| Gene: | nei (Escherichia coli) | ||||||
| Coordinates: | save as pdb, mmCIF, xml | ||||||
Crystal structure of the DNA repair enzyme endonuclease-VIII (Nei) from E. coli (R252A) in complex with AP-site containing DNA substrate
About this Structure
2OPF is a Protein complex structure of sequences from Escherichia coli. Full crystallographic information is available from OCA.
Page seeded by OCA on Thu Mar 20 18:02:44 2008
