4e0k
From Proteopedia
(Difference between revisions)
Line 1: | Line 1: | ||
- | + | ==Crystal Structure of the amyloid-fibril forming peptide KDWSFY derived from human Beta 2 Microglobulin (58-63)== | |
- | + | <StructureSection load='4e0k' size='340' side='right' caption='[[4e0k]], [[Resolution|resolution]] 0.97Å' scene=''> | |
- | {{ | + | == Structural highlights == |
+ | <table><tr><td colspan='2'>[[4e0k]] is a 4 chain structure. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4E0K OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4E0K FirstGlance]. <br> | ||
+ | </td></tr><tr id='ligand'><td class="sblockLbl"><b>[[Ligand|Ligands:]]</b></td><td class="sblockDat"><scene name='pdbligand=NA:SODIUM+ION'>NA</scene>, <scene name='pdbligand=PE4:2-{2-[2-(2-{2-[2-(2-ETHOXY-ETHOXY)-ETHOXY]-ETHOXY}-ETHOXY)-ETHOXY]-ETHOXY}-ETHANOL'>PE4</scene></td></tr> | ||
+ | <tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4e0l|4e0l]], [[4e0m|4e0m]], [[4e0n|4e0n]], [[4e0o|4e0o]]</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4e0k FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4e0k OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4e0k RCSB], [http://www.ebi.ac.uk/pdbsum/4e0k PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Although aberrant protein aggregation has been conclusively linked to dozens of devastating amyloid diseases, scientists remain puzzled about the molecular features that render amyloid fibrils or small oligomers toxic. Here, we report a previously unobserved type of amyloid fibril that tests as cytotoxic: one in which the strands of the contributing beta-sheets are out of register. In all amyloid fibrils previously characterized at the molecular level, only in-register beta-sheets have been observed, in which each strand makes its full complement of hydrogen bonds with the strands above and below it in the fibril. In out-of-register sheets, strands are sheared relative to one another, leaving dangling hydrogen bonds. Based on this finding, we designed out-of-register beta-sheet amyloid mimics, which form both cylindrin-like oligomers and fibrils, and these mimics are cytotoxic. Structural and energetic considerations suggest that out-of-register fibrils can readily convert to toxic cylindrins. We propose that out-of-register beta-sheets and their related cylindrins are part of a toxic amyloid pathway, which is distinct from the more energetically favored in-register amyloid pathway. | ||
- | + | Out-of-register beta-sheets suggest a pathway to toxic amyloid aggregates.,Liu C, Zhao M, Jiang L, Cheng PN, Park J, Sawaya MR, Pensalfini A, Gou D, Berk AJ, Glabe CG, Nowick J, Eisenberg D Proc Natl Acad Sci U S A. 2012 Dec 3. PMID:23213214<ref>PMID:23213214</ref> | |
- | + | ||
- | == | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> |
- | + | </div> | |
- | [[Category: Eisenberg, D | + | == References == |
- | [[Category: Liu, C | + | <references/> |
- | [[Category: Sawaya, M R | + | __TOC__ |
- | [[Category: Zhao, M | + | </StructureSection> |
+ | [[Category: Eisenberg, D]] | ||
+ | [[Category: Liu, C]] | ||
+ | [[Category: Sawaya, M R]] | ||
+ | [[Category: Zhao, M]] | ||
[[Category: Amyloid]] | [[Category: Amyloid]] | ||
[[Category: Fiber-forming]] | [[Category: Fiber-forming]] | ||
[[Category: Out-of-register]] | [[Category: Out-of-register]] | ||
[[Category: Protein fibril]] | [[Category: Protein fibril]] |
Revision as of 07:31, 15 February 2015
Crystal Structure of the amyloid-fibril forming peptide KDWSFY derived from human Beta 2 Microglobulin (58-63)
|