4gyg
From Proteopedia
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- | [[ | + | ==Crystal structure of the Rio2 kinase from Chaetomium thermophilum== |
+ | <StructureSection load='4gyg' size='340' side='right' caption='[[4gyg]], [[Resolution|resolution]] 2.48Å' scene=''> | ||
+ | == Structural highlights == | ||
+ | <table><tr><td colspan='2'>[[4gyg]] is a 1 chain structure with sequence from [http://en.wikipedia.org/wiki/Chaetomium_thermophilum_var._thermophilum_dsm_1495 Chaetomium thermophilum var. thermophilum dsm 1495]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=4GYG OCA]. For a <b>guided tour on the structure components</b> use [http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4GYG FirstGlance]. <br> | ||
+ | </td></tr><tr id='related'><td class="sblockLbl"><b>[[Related_structure|Related:]]</b></td><td class="sblockDat">[[4gyi|4gyi]]</td></tr> | ||
+ | <tr id='gene'><td class="sblockLbl"><b>[[Gene|Gene:]]</b></td><td class="sblockDat">CTHT_0033330, Rio2 ([http://www.ncbi.nlm.nih.gov/Taxonomy/Browser/wwwtax.cgi?mode=Info&srchmode=5&id=759272 Chaetomium thermophilum var. thermophilum DSM 1495])</td></tr> | ||
+ | <tr id='resources'><td class="sblockLbl"><b>Resources:</b></td><td class="sblockDat"><span class='plainlinks'>[http://oca.weizmann.ac.il/oca-docs/fgij/fg.htm?mol=4gyg FirstGlance], [http://oca.weizmann.ac.il/oca-bin/ocaids?id=4gyg OCA], [http://www.rcsb.org/pdb/explore.do?structureId=4gyg RCSB], [http://www.ebi.ac.uk/pdbsum/4gyg PDBsum]</span></td></tr> | ||
+ | </table> | ||
+ | <div style="background-color:#fffaf0;"> | ||
+ | == Publication Abstract from PubMed == | ||
+ | Ribosome synthesis involves dynamic association of ribosome-biogenesis factors with evolving preribosomal particles. Rio2 is an atypical protein kinase required for pre-40S subunit maturation. We report the crystal structure of eukaryotic Rio2-ATP-Mg(2+) complex. The active site contains ADP-Mg(2+) and a phosphoaspartate intermediate typically found in Na(+), K(+) and Ca(2+) ATPases but not protein kinases. Consistent with this finding, ctRio2 exhibits a robust ATPase activity in vitro. In vivo, Rio2 docks on the ribosome, with its active site occluded and its flexible loop positioned to interact with the pre-40S subunit. Moreover, Rio2 catalytic activity is required for its dissociation from the ribosome, a necessary step in pre-40S maturation. We propose that phosphoryl transfer from ATP to Asp257 in Rio2's active site and subsequent hydrolysis of the aspartylphosphate could be a trigger to power late cytoplasmic 40S subunit biogenesis. | ||
- | + | ATPase-dependent role of the atypical kinase Rio2 on the evolving pre-40S ribosomal subunit.,Ferreira-Cerca S, Sagar V, Schafer T, Diop M, Wesseling AM, Lu H, Chai E, Hurt E, Laronde-Leblanc N Nat Struct Mol Biol. 2012 Dec;19(12):1316-23. doi: 10.1038/nsmb.2403. Epub 2012, Oct 28. PMID:23104056<ref>PMID:23104056</ref> | |
- | + | From MEDLINE®/PubMed®, a database of the U.S. National Library of Medicine.<br> | |
- | + | </div> | |
- | + | == References == | |
- | + | <references/> | |
- | == | + | __TOC__ |
- | + | </StructureSection> | |
[[Category: Chaetomium thermophilum var. thermophilum dsm 1495]] | [[Category: Chaetomium thermophilum var. thermophilum dsm 1495]] | ||
- | [[Category: Chai, E | + | [[Category: Chai, E]] |
- | [[Category: Diop, M | + | [[Category: Diop, M]] |
- | [[Category: Ferreira-Cerca, S | + | [[Category: Ferreira-Cerca, S]] |
- | [[Category: Hurt, E | + | [[Category: Hurt, E]] |
- | [[Category: LaRonde-LeBlanc, N | + | [[Category: LaRonde-LeBlanc, N]] |
- | [[Category: Lu, H | + | [[Category: Lu, H]] |
- | [[Category: Sagar, V | + | [[Category: Sagar, V]] |
- | [[Category: Schafer, T | + | [[Category: Schafer, T]] |
- | [[Category: Wesseling, A M | + | [[Category: Wesseling, A M]] |
[[Category: Phosphorylation]] | [[Category: Phosphorylation]] | ||
[[Category: Pre-40]] | [[Category: Pre-40]] |
Revision as of 08:46, 15 February 2015
Crystal structure of the Rio2 kinase from Chaetomium thermophilum
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Categories: Chaetomium thermophilum var. thermophilum dsm 1495 | Chai, E | Diop, M | Ferreira-Cerca, S | Hurt, E | LaRonde-LeBlanc, N | Lu, H | Sagar, V | Schafer, T | Wesseling, A M | Phosphorylation | Pre-40 | Pre-40s maturation | Ribosomal rna | Ribosomal rna processing | Ribosome biogenesis factor | Rio-type ser/thr protein kinase | Transferase