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To understand the mechanisms of tryptophan synthase, the structure of the enzyme must first be studied. The general form of the enzyme is an alpha-beta-beta-alpha complex in which the alpha subunit forms a TIM barrel and the beta subunit has a type II fold conformation. Additionally, the enzyme has two binding sites: an indole 3-glycerol binding site and an indole and serine binding site. Another important feature that allows for the tryptophan synthase to perform its function is its hydrophobic channel which makes it possible for indoles to diffuse to the appropriate site instead of diffusing out to cell’s cytosol.

Function

The mechanism of tryptophan synthase can be described in two steps. These steps are the last two in the synthesis of tryptophan. They include the loss of glyceraldehyde 3-phosphate from indole 3-glyserinphosphate forming indole and then the change from indole into tryptophan via the binding of serine and loss of water.

Relevance

Structural highlights

The structure of Tryptophan Synthase is in an alpha-beta-beta-alpha complex with two binding sites: an indole 3-glycerol binding site and an indole and serine binding site.