2z5m
From Proteopedia
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| - | [[Image:2z5m.gif|left|200px]] | + | [[Image:2z5m.gif|left|200px]] |
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| - | '''Complex of Transportin 1 with TAP NLS, crystal form 2''' | + | {{Structure |
| + | |PDB= 2z5m |SIZE=350|CAPTION= <scene name='initialview01'>2z5m</scene>, resolution 3.00Å | ||
| + | |SITE= | ||
| + | |LIGAND= | ||
| + | |ACTIVITY= | ||
| + | |GENE= | ||
| + | }} | ||
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| + | '''Complex of Transportin 1 with TAP NLS, crystal form 2''' | ||
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==Overview== | ==Overview== | ||
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==About this Structure== | ==About this Structure== | ||
| - | 2Z5M is a [ | + | 2Z5M is a [[Protein complex]] structure of sequences from [http://en.wikipedia.org/wiki/Homo_sapiens Homo sapiens]. Full crystallographic information is available from [http://oca.weizmann.ac.il/oca-bin/ocashort?id=2Z5M OCA]. |
==Reference== | ==Reference== | ||
| - | Structural basis for substrate recognition and dissociation by human transportin 1., Imasaki T, Shimizu T, Hashimoto H, Hidaka Y, Kose S, Imamoto N, Yamada M, Sato M, Mol Cell. 2007 Oct 12;28(1):57-67. PMID:[http:// | + | Structural basis for substrate recognition and dissociation by human transportin 1., Imasaki T, Shimizu T, Hashimoto H, Hidaka Y, Kose S, Imamoto N, Yamada M, Sato M, Mol Cell. 2007 Oct 12;28(1):57-67. PMID:[http://www.ncbi.nlm.nih.gov/pubmed/17936704 17936704] |
[[Category: Homo sapiens]] | [[Category: Homo sapiens]] | ||
[[Category: Protein complex]] | [[Category: Protein complex]] | ||
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[[Category: importin]] | [[Category: importin]] | ||
[[Category: karyopherin]] | [[Category: karyopherin]] | ||
| - | [[Category: | + | [[Category: nl]] |
[[Category: nuclear transport]] | [[Category: nuclear transport]] | ||
[[Category: nucleocytoplasmic]] | [[Category: nucleocytoplasmic]] | ||
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[[Category: transport protein/rna binding protein complex]] | [[Category: transport protein/rna binding protein complex]] | ||
| - | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu | + | ''Page seeded by [http://oca.weizmann.ac.il/oca OCA ] on Thu Mar 20 18:52:23 2008'' |
Revision as of 16:52, 20 March 2008
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| , resolution 3.00Å | |||||||
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| Coordinates: | save as pdb, mmCIF, xml | ||||||
Complex of Transportin 1 with TAP NLS, crystal form 2
Contents |
Overview
Transportin 1 (Trn1) is a transport receptor that transports substrates from the cytoplasm to the nucleus through nuclear pore complexes by recognizing nuclear localization signals (NLSs). Here we describe four crystal structures of human Trn1 in a substrate-free form as well as in the complex with three NLSs (hnRNP D, JKTBP, and TAP, respectively). Our data have revealed that (1) Trn1 has two sites for binding NLSs, one with high affinity (site A) and one with low affinity (site B), and NLS interaction at site B controls overall binding affinity for Trn1; (2) Trn1 recognizes the NLSs at site A followed by conformational change at site B to interact with the NLSs; and (3) a long flexible loop, characteristic of Trn1, interacts with site B, thereby displacing transport substrate in the nucleus. These studies provide deep understanding of substrate recognition and dissociation by Trn1 in import pathways.
Disease
Known diseases associated with this structure: Bare lymphocyte syndrome, type I OMIM:[170260], Deafness, mitochondrial, modifier of OMIM:[610230]
About this Structure
2Z5M is a Protein complex structure of sequences from Homo sapiens. Full crystallographic information is available from OCA.
Reference
Structural basis for substrate recognition and dissociation by human transportin 1., Imasaki T, Shimizu T, Hashimoto H, Hidaka Y, Kose S, Imamoto N, Yamada M, Sato M, Mol Cell. 2007 Oct 12;28(1):57-67. PMID:17936704
Page seeded by OCA on Thu Mar 20 18:52:23 2008
